Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0193 ATGTGGCGGAGACTTGTCTCTTCTCACCTCAAATCCCTAGCTTCTACTTCCCGATCTGCCCCCATCGCCGCCCGATTCACCGCCACCACTCCCTCCTGTGTTTCTCCCTCATCGTATTTCCTCACCCGCCACTTCACCACGCAGTCCGcGGATAATGCTATCAAAAAGAAGGTTGAGGATGTAATGCCAATTGCTACTGGACATGAGCGCGAGGAGATTGAAGCTGAGCTTGAGGGGAAGAAGCTTCTTGATATTAACTATCCTGAAGGTCCTTTTGGTACAAAGGAAGCACCAGCGGTTATTAAGTCTTACTATGACAAAAGAATAGTTGGATGCCCAGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGTTGGAGAAAGACAAGCCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTGGTGGGACCTGGTGGACCACCTGATGGACATGGCGATGACGATGATCATCATCACCATTGA 501 0.491 MWRRLVSSHLKSLASTSRSAPIAARFTATTPSCVSPSSYFLTRHFTTQSADNAIKKKVEDVMPIATGHEREEIEAELEGKKLLDINYPEGPFGTKEAPAVIKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCSQYFVLEVVGPGGPPDGHGDDDDHHHH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0193 166 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 165 IPR002124 GO:0005740|GO:0005751|GO:0006123
Sto1g0193 166 PANTHER - 1 165 - -
Sto1g0193 166 Gene3D Cytochrome c oxidase, subunit Vb 54 148 IPR036972 GO:0005740|GO:0005751|GO:0006123
Sto1g0193 166 Pfam Cytochrome c oxidase subunit Vb 64 151 IPR002124 GO:0005740|GO:0005751|GO:0006123
Sto1g0193 166 SUPERFAMILY Rubredoxin-like 54 151 - -
Sto1g0193 166 CDD Cyt_c_Oxidase_Vb 53 148 IPR002124 GO:0005740|GO:0005751|GO:0006123
Sto1g0193 166 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 53 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0193 Sto-Chr1 1364616 1367692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0193 K02265 - tcc:18595775 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0399 9 3895326 3903904 Sto1g0193 1 1364616 1367692 CCT
Sto1g0193 1 1364616 1367692 Sto1g0193 1 1364616 1367692 ECH