Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3404 ATGGATTCCCAATCCCTCCAACCATTTATGGATACTCCTTCTCACTCCGACACCCCCACCCCTACCCCTACCCCCACCGCCAGCCGCTACGAGAACCAGAAGCGGCGTGACTGGAATACCTTCGGTCAGTACCTCAAGAACCACCGTCCTCCTCTCTCCCTTTCTAGATGCAGCGGTGCACACGTCCTTGAATTTCTAAGGTACCTGGACCAATTCGGGAAAACGAAAGTGCACACAGCCATGTGCCCTTTCTACGGGCACCCGAACCCTCCGGGTCCATGCCCGTGCCCGCTTCGGCAAGCGTGGGGTAGCCTGGACGCGCTGATCGGGCGTCTACGCGCGGCGTTCGAAGAGAACGGAGGGAAAGCAGAGGCGAACCCTTTTGGAGCTCGAGCGGTGAGGCTGTACCTTCGTGAGGTTCGTGATGTGCAGTCCAAAGCAcgagggattagctacgaaaagaagaagagaaagcgCCAACCTCCACCTCATCAATAA 498 0.5402 MDSQSLQPFMDTPSHSDTPTPTPTPTASRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTAMCPFYGHPNPPGPCPCPLRQAWGSLDALIGRLRAAFEENGGKAEANPFGARAVRLYLREVRDVQSKARGISYEKKKRKRQPPPHQ 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3404 165 PANTHER G1-LIKE PROTEIN 16 163 - -
Sto13g3404 165 PANTHER PROTEIN G1-LIKE2 16 163 IPR040222 -
Sto13g3404 165 MobiDBLite consensus disorder prediction 1 33 - -
Sto13g3404 165 Pfam ALOG domain 22 142 IPR006936 -
Sto13g3404 165 ProSiteProfiles ALOG domain profile. 29 156 IPR006936 -
Sto13g3404 165 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3404 Sto-Chr13 37248836 37249413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3404 - - tcc:18613129 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g4004 13 40820271 40821229 Sto13g3404 13 37248836 37249413 CCT
Sto13g3404 13 37248836 37249413 Sto8g0711 8 4471271 4472197 CCT
Sto13g3404 13 37248836 37249413 Sto13g4004 13 40820271 40821229 ECH
Sto13g3404 13 37248836 37249413 Sto13g3404 13 37248836 37249413 ECH
Sto8g0711 8 4471271 4472197 Sto13g3404 13 37248836 37249413 ECH
Sto12g1794 12 13643229 13646361 Sto13g3404 13 37248836 37249413 ECH