Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3197 ATGGGAAGCGGGTCGACATTGGCTGGGAAGGAAGTTCCCATAATCGGTAGCGACGCCGTCAGATGGATTGAATTGTCGGTGCCTTCTTCCTCAACTAGTGACGCTGCCGCTGCTGCCGTTGACGGTGGTGCTGCCACTCTTGGACCCCCCAACGAGGACCGGGCCTCTTGCTTCGTTGTCGGAGACTCTTCTACTTATCTGATATGGAAAATTCACAAGACGCAGCCTCAAACAATCGAGTTACTGGAGCTCCGTGCTTCCCAAGAATTTCCTAGACTTGGATTGAGATTCACTTTCCCTGATGCACTCTGCCCATTTGCCTTTATCTGCAAAAATGAGAATACTGCCGCAGCTAGATTCCCATACTTACTTTATGTGTTGACTGCGTCTGGGGTTGCTTACCTCTTGAAAATTAGAAATGTTTCTATGTATTCTTCCTGCGCCATAGTTCCGGTAGATGAGTTCATAGAGCTTAACGTGCTCAATCATTCAAATCATATAGCAGTGACTGCAGTAACAGCGTCTTCCGGGTGTCTTGTTGTTGGCAGAAATGATGGTTCTGTGTGCTGTTTCCAGCTTGGTGTACTTGACCCAAGTTATCCTGGTTTTTTGATTGAGCTGCGAGATGAAGCTGGAATCAGCCGATTGTGGGGTTTCATGTCACGGGGTAAATCGGTGAGTCCAGTGCAAGACTTGGTAATACTTGAGTTTCATGGGAAAAGATTTGTGTTTGTGCTTCACTTGGATGGGACATTACGAGTTTGGGATCTTGTATTTAATAGCAGGGTCTTTACTCATACTATGGGCACTTCAACCATGGCTGAATTATGGGTGGGTCAACCTCGCCTGGATTCAAGTACAATTCCAGTGGCAATCTTGTACAGACATTCTTTGGATGAAAGCTTGGAGATGATCTCTATACACAATATTGAATATAACTTTGGTGAAAGAATTGCTTTCTCAATGGAGACTTCTGTACAAAATATCCCCTTGGAGGAGGGAGGATGCATTGATGTCAAATTAACTTCAGACAAGATATGGATACTGAAGGATGATGAATTAGTATCACACATGTTTTCTGCAAATACCGATGAGGAAGAAGGATTTTCTTATGCATTACAGGAGGAGTTTATTGCTGACCAACTATTTCAGAGTTCAGAACATCTTGCAGATGAAATTTTGCGGATTGCACAttcattattttcttcttcaaagGATGATGTTGTGCCCTTTGTATCTTCAATTTTCTTGCGCAGGCTGTTTCTTCCCGGGGTGCATCACAATGCTGTTTTGTATGCAACTCTAATTGATTATAAAAAACATTTGATTGAATCTGAATTCCAAGCCTTAACTGCTGACGGACTAAAAAAGGAGATACTCTCACTTATTGAACATGAGGTTGGAACTGAAAAGATGTCCATATTTCATTGTTGGAAGTATTTTTGTACCAGCTATTTCCATAATTGGTGCAAGAACAATGCGCCATGTGGCTTGATTGTTGACTCCTCTGTTGAAGCGATTGGTGTAATTAGAAAAAGTTCAGTATCACTTTTTCGGTCATTAGAAGATATTGAGCGGATTATAGAAGCCTCTTCAGAAGAAGGTGGTGATCTCACAGGTCTAGTAGATTTATTTGATGATGATCTTGAAGGTGAAATTCCAACAGAATTGCTCAGATGTGTTTTAAGTTTTAGCCAACAGTTGGGCAAAACTGCTTCTTCTATATTTTATGAATCACTTCTAAGTGCCCCAGTGATCTCCTCTGAAGATATTATTAACTGTATAGTGAAGATACTGGAAACTGGATATGGGAATAATATGGTTCTGGAGAAGGAGCTCACAGATCACAGAAATCTGAGGAAACTTTCTGTTGACTTGTTCTTGTCTCTTCAAGGCCTGTACAGGAAGGCTGCTGCATGGGGCAGGATTTTAAATGTAATAGAGGGTTTCCTGAAATTTTTGGTTCCACAGAGAATTGTGCATAACTTAGACACTGAAAAATCATCAAATATCAATTCCTCCATTGTAGTCCATGCTACATATCAGATTGCAAAGGTGATGTTTGAATCTGCCTGGGACTTTCTGTTATTTCTAAGCTATCTGGTGGACATCAGTGGGCAGATCCACATGTCGCATGATGATATAACCAAAATACGAATTGAGTTACTTCCAATGCTTCAAGAAATTATATTTGAGTGGCTAATTATCATCTTCTTTGCCATCACACCATCTGCACCAGCTGTAATTGAAGACTTCAATTATAAACTTTCATCATTACAAATTGATAGCAACATGGGAAAAAGGTCTTGGAAAGAGAAGCTTGGCAGATGTGACTTCTCATTGGCTCTTATATTCTTGCTGAATACTAGAAGTACATCCATAGATGGTAGCCAGCTTTCTCCAGAATGCTTTTCAAATATGCAAAGCATTGTAGATAAGATTAGAGACTTTGTCAGTTGGATTATCTGGGGTCAGGGTGGAGGATCTTCTACCTTTGTGAGCCGCTCAATTGATCTATCCTTTATCCTTTTCAAGCATGGGCAGTATGGTGCTGCTGAGCATTTGCTTACAATGGCGGAGGCACATTTACAAAGGGAGAAGACATCCCAAAGTATTCAAGAAGATGATGGTGGATGGTGCATACGCCATCATCTTCTAGGATGTTCCCTACTAGCACAGGTGCAGTGTGGATTGCATGGCACTCTGAAAGAGAAAAAAGTCTGCGATGCCGTTCGCTGTTTCTTCAGGTCTTCATCTGGGAATGGCGCATCTGTGGCTTTGCAGAGTTTGCCTCCTGACATTGGATTGCCATATCTTAGTTTTGGTAATTGTGCGTCTACTGCTGAATGGAGGCTTTATTACTATCAATGGGCAATGCAATTATTTgaacaatataatattaatgatgGTGCTTGCCAGTTTGCTCTCGCTGCACTTGAGCAAGTTGATGAAGCTCTACATTTGAGAGATGACAGACACATGAGAGACACAACCGAAGAATCAGAAACCACCATCAAGGGACGGCTTTGGGCTAATGTCTTCAAATTTGCTTTAGATCTTGGCTGCTATTTTGATGCATATTGTGCAATAATTTCAAATCCAGATGAGGAGAGTAAATACATCTGCTTGAGACGTTTCATTATTGTTCTCTATGAGCAAGGTGCTATCAAGatTCTCTGCAGCAATAAGCTTCCCCTAACTGGTTTAATGGAGAAGGTTGAGCAAGAGCTTGCTTGGAAGGCTGAAAGATCAGATATATCTGCAAAGCCAAACTTATACAAGTTGCTTTATGCATTTCAAATGCATCAAAATAATTGGAGACAGGCAGCAAATTACATGTACCTGTATTCAGCTCGATTGAGAGCTGAAGTAGCACTAAAAGATTATCAGGGTTCTTCCCTGATATTGCAAGAGAGGATGAATGCGCTTTCTGCTGCTATTAATGCATTGCATCTTGTTCATCCTGCATATGCCTGGATTGATTCTCCGGCTGATGGAAGTGCTCTTATGAGTGAACAGTATCCAAGTAAGAAAGCTAAAAGAGCTGTAGATACAGATTTACCAGCTGAACATGGTGCTGAGAGTGAAAGCTGGCATTCTTCTATTGATGTCGAAAAACTTGAGAATGAGTTTGTCCTAACATCAGCAGAATACATGCTATCACTGGTACATGTCAAGTGGACATATACTGGAAAACAAGGAGCCCTGTCACATTTGGCTGATCTCCTTGTCCAGAACAATTTATATGACATGGCCTTCACAATTCTTCTCAGATTCTTTAGGGGTTCAGGACTGAAGAGGGAACTAGAAAGAGTTTTCTCTGCTATATCATTGAAATGCTGTCTTGATAAAGTAGAATCCACTTTGGTTGAGCCACAGGGTCATCTGTTGACATCATCAAAGCTTGAAATGGTTGTCCATGGTTCACCTCTTCCAGGTCCTCCAACTCCACAACCTGACAAGAGCAGCCATTGGGCAACTCTTGAGCGTTACCTTGACAAATATTGTGAATTTCATGGTAGGCTACCGGTTACTGTTGCTGAAACCATTCTTCGGGCAGATCCTCAGATTGAATTGCCTCGTTGGTTAGTTCAATTGTTCAAGGAGGGTCAGAGGGAAAAAATATGGGGGATGGCTGGCCGAGAATCAAATCCTGCACTCTTATTTCAACTTTATGTTAGCTATGGTCGATATGCAGAAGCTACTAATCTGTTGCTGGAGTTCATAGAATCATTTACATCAACGAGACCAGCAGATATAATTAGACGGAAAAAACCATTTGCTGTTTGGTTCCCATACACTACAATTGAGCGGCTACTTTATCAACTCGAGGAGTTGATCAAGATGGGTCACATGGTAGATCAATGTGACAAGCTCAAAAAGATGTTACATGGGTCTTTGAGTAGTCATCTTAAGCTGTTAAAGGAGGACTCGGATGATGCAATTTCTGTAGCCAGTTGA 4461 0.4116 MGSGSTLAGKEVPIIGSDAVRWIELSVPSSSTSDAAAAAVDGGAATLGPPNEDRASCFVVGDSSTYLIWKIHKTQPQTIELLELRASQEFPRLGLRFTFPDALCPFAFICKNENTAAARFPYLLYVLTASGVAYLLKIRNVSMYSSCAIVPVDEFIELNVLNHSNHIAVTAVTASSGCLVVGRNDGSVCCFQLGVLDPSYPGFLIELRDEAGISRLWGFMSRGKSVSPVQDLVILEFHGKRFVFVLHLDGTLRVWDLVFNSRVFTHTMGTSTMAELWVGQPRLDSSTIPVAILYRHSLDESLEMISIHNIEYNFGERIAFSMETSVQNIPLEEGGCIDVKLTSDKIWILKDDELVSHMFSANTDEEEGFSYALQEEFIADQLFQSSEHLADEILRIAHSLFSSSKDDVVPFVSSIFLRRLFLPGVHHNAVLYATLIDYKKHLIESEFQALTADGLKKEILSLIEHEVGTEKMSIFHCWKYFCTSYFHNWCKNNAPCGLIVDSSVEAIGVIRKSSVSLFRSLEDIERIIEASSEEGGDLTGLVDLFDDDLEGEIPTELLRCVLSFSQQLGKTASSIFYESLLSAPVISSEDIINCIVKILETGYGNNMVLEKELTDHRNLRKLSVDLFLSLQGLYRKAAAWGRILNVIEGFLKFLVPQRIVHNLDTEKSSNINSSIVVHATYQIAKVMFESAWDFLLFLSYLVDISGQIHMSHDDITKIRIELLPMLQEIIFEWLIIIFFAITPSAPAVIEDFNYKLSSLQIDSNMGKRSWKEKLGRCDFSLALIFLLNTRSTSIDGSQLSPECFSNMQSIVDKIRDFVSWIIWGQGGGSSTFVSRSIDLSFILFKHGQYGAAEHLLTMAEAHLQREKTSQSIQEDDGGWCIRHHLLGCSLLAQVQCGLHGTLKEKKVCDAVRCFFRSSSGNGASVALQSLPPDIGLPYLSFGNCASTAEWRLYYYQWAMQLFEQYNINDGACQFALAALEQVDEALHLRDDRHMRDTTEESETTIKGRLWANVFKFALDLGCYFDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSNKLPLTGLMEKVEQELAWKAERSDISAKPNLYKLLYAFQMHQNNWRQAANYMYLYSARLRAEVALKDYQGSSLILQERMNALSAAINALHLVHPAYAWIDSPADGSALMSEQYPSKKAKRAVDTDLPAEHGAESESWHSSIDVEKLENEFVLTSAEYMLSLVHVKWTYTGKQGALSHLADLLVQNNLYDMAFTILLRFFRGSGLKRELERVFSAISLKCCLDKVESTLVEPQGHLLTSSKLEMVVHGSPLPGPPTPQPDKSSHWATLERYLDKYCEFHGRLPVTVAETILRADPQIELPRWLVQLFKEGQREKIWGMAGRESNPALLFQLYVSYGRYAEATNLLLEFIESFTSTRPADIIRRKKPFAVWFPYTTIERLLYQLEELIKMGHMVDQCDKLKKMLHGSLSSHLKLLKEDSDDAISVAS 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3197 1486 Pfam Nucleoporin Nup120/160 64 527 - -
Sto13g3197 1486 SUPERFAMILY WD40 repeat-like 113 268 IPR036322 GO:0005515
Sto13g3197 1486 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP160 4 1471 IPR021717 -
Sto13g3197 1486 Pfam Family of unknown function (DUF5311) 542 722 IPR035192 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3197 - K14303 gmx:100807578 2211.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3197 13 36006029 36018415 Sto8g0920 8 5785701 5789733 CCT