Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0674 ATGGGTGGGAAACCGAAGAATGTTGAAGAATCGGGATCAAAATGTTGCAATCCTGTTAAGAAACCGGGACCCGTGACAATGGATCATGTTCTACTAGCATCTCAGGAGACCAAGGAAGAGAGGGAGCTTAGGATTAGTAGCCTTTTTAGTTTCTTTGATACCACGAATGCTGGCTATTTAGATTATGCCCGGATTGAGGCTGGTCTCTCTGCACTGCAAATACCGTCTGAGTATAAGTATGCCAAGGATTTGTTAAATGCTTGTGATGCTGATAAAGATGGACGAGTTAATTACCAAGATTTCAAAAAGTACATGGATGACAAAGAGCTGGAACTTTACCGCATATTTCAAGCCATTGATGTTGAACATAATGGATGTATTTTGCCAGAGGAGCTCTGGGAGGCACTTGTAAAAGCAGggattcAGATTGATGATGAGGAACTTGCCCGTTTTGTGGAGCGTGTTGATAAGGATAATAATGGGGTTATAACATTTGAAGAATGGAGGGATTTTCTGCTGCTTTACCCTCATGAGGCAACTATTGAGAACATTTACCATTACTTGGAGAGGGTGTGCCTGGTCGATATTGGGGAACACACTGTTATTCCTGCAGGCATTAGCAAGCACATCCATGCAAGTCGGTATCTGATTGCTGGAGGAGTAGCAGGTGCAGCATCACGAACAGCAACCGCACCTCttgatattttgaaagttattttGCAAGTCCAAACAGGACAAGCTCGTATAGTGCCTGCCGTAAAGAATATATGGAGTGAAGGTGGTTTATTTGGATTTTTCCGAGGAAATGGCTTGAATGTCATTAAGGTGACTCCTGAGAGTGCTATTAGATTTTACACCTATGAGATGCTGAAGACCGTCATTGTGAATAGCAAAGGACAGGAAACAAAGGCTGATATTGGCACCATGGGCCGACTGTTAGCTGGGGGTATTGCTGGTGCTGTGGCTCAAACTGCAATATATCCAATGGATCTTGTCAAAACTCGAATACAAACTTGTTCTTATGGTGGTGGAAAAGTTCCAAGTCTTGGGAGCCTCTCAAAAGATATATGGGTACATGAAGGACCGAGGGCATTTTATAGGGGATTGTTTCCTTCTCTTCTTGGGATCATCCCTTATGCTGGCATAGATCTTTCTGCTTATGAAACCTTGAAAGATATGTCCAAGAAGTATATTCTTCACGACGGCGAACCTGGTCCTCTTGTACAACTGGGATGTGGGACGGTATCAGGAGCCCTTGGAGCAACTTGTGTTTACCCATTGCAGGTTGTTAGAACAAGAATGCAGGCTCATCGAGCTAATGCTGGCGCTGGATATAATGGAATGGCCGATGTATTCAGGAGAACCTTTGAGCATGAAGGGTGGAGGGGATTCTATAAAGGAATATTTCCCAATCTACTCAAAGTTGTTCCATCTGCAAGTATCACTTATATGGTTTATGAGTATATGAAAAAGGGTTTGGATTTGGACTGA 1491 0.4266 MGGKPKNVEESGSKCCNPVKKPGPVTMDHVLLASQETKEERELRISSLFSFFDTTNAGYLDYARIEAGLSALQIPSEYKYAKDLLNACDADKDGRVNYQDFKKYMDDKELELYRIFQAIDVEHNGCILPEELWEALVKAGIQIDDEELARFVERVDKDNNGVITFEEWRDFLLLYPHEATIENIYHYLERVCLVDIGEHTVIPAGISKHIHASRYLIAGGVAGAASRTATAPLDILKVILQVQTGQARIVPAVKNIWSEGGLFGFFRGNGLNVIKVTPESAIRFYTYEMLKTVIVNSKGQETKADIGTMGRLLAGGIAGAVAQTAIYPMDLVKTRIQTCSYGGGKVPSLGSLSKDIWVHEGPRAFYRGLFPSLLGIIPYAGIDLSAYETLKDMSKKYILHDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAHRANAGAGYNGMADVFRRTFEHEGWRGFYKGIFPNLLKVVPSASITYMVYEYMKKGLDLD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0674 496 ProSitePatterns EF-hand calcium-binding domain. 156 168 IPR018247 -
Sto13g0674 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 393 IPR018108 -
Sto13g0674 496 Gene3D Mitochondrial carrier domain 206 493 IPR023395 -
Sto13g0674 496 ProSiteProfiles EF-hand calcium-binding domain profile. 143 178 IPR002048 GO:0005509
Sto13g0674 496 SUPERFAMILY Mitochondrial carrier 209 489 IPR023395 -
Sto13g0674 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 404 492 IPR018108 -
Sto13g0674 496 ProSitePatterns EF-hand calcium-binding domain. 89 101 IPR018247 -
Sto13g0674 496 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 293 IPR018108 -
Sto13g0674 496 ProSiteProfiles EF-hand calcium-binding domain profile. 112 142 IPR002048 GO:0005509
Sto13g0674 496 SUPERFAMILY EF-hand 36 209 IPR011992 -
Sto13g0674 496 SMART efh_1 147 175 IPR002048 GO:0005509
Sto13g0674 496 SMART efh_1 80 108 IPR002048 GO:0005509
Sto13g0674 496 SMART efh_1 44 72 IPR002048 GO:0005509
Sto13g0674 496 SMART efh_1 111 139 IPR002048 GO:0005509
Sto13g0674 496 Pfam EF-hand domain pair 111 170 IPR002048 GO:0005509
Sto13g0674 496 MobiDBLite consensus disorder prediction 1 21 - -
Sto13g0674 496 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Sto13g0674 496 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 54 494 - -
Sto13g0674 496 PANTHER SOLUTE CARRIER FAMILY 25 54 494 - -
Sto13g0674 496 Gene3D - 27 188 - -
Sto13g0674 496 Pfam Mitochondrial carrier protein 209 297 IPR018108 -
Sto13g0674 496 Pfam Mitochondrial carrier protein 405 493 IPR018108 -
Sto13g0674 496 Pfam Mitochondrial carrier protein 306 396 IPR018108 -
Sto13g0674 496 CDD EFh 111 172 IPR002048 GO:0005509
Sto13g0674 496 Pfam EF-hand domain pair 75 107 IPR002048 GO:0005509
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 215 228 IPR002067 GO:0055085
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 228 242 IPR002067 GO:0055085
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 268 288 IPR002067 GO:0055085
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 321 339 IPR002067 GO:0055085
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 366 384 IPR002067 GO:0055085
Sto13g0674 496 PRINTS Mitochondrial carrier protein signature 413 435 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0674 Sto-Chr13 6326194 6329252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0674 3 496 EF-hand Containing Proteins AT5G51050 72.892 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0674 K14684 - jre:108992046 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0674 13 6326194 6329252 Sto13g0674 13 6326194 6329252 ECH
Sto8g1612 8 10355350 10358190 Sto13g0674 13 6326194 6329252 ECH