Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1070 ATGAATCTCACTATCTCAGTGGTGGAGTATATTCTGATTTCTGAGGGGCGAGAAGATAAGCTTGTCTTAGAGATGGCTAAACATAGAAATACCATTACAGGGAAAGAGATAGCTAGGCTGCTAGTTCATGATCAACTTAGTCCAACTCTAACACTGAGCCATAGGTGGGGTTTTGGGGATATTGGATTCCATCGAAGTCTTCCACCGCGTCTCTTCCCCTGGATATGTTCTTCTCCAATAATGCACAGGAATCAAGAAAAGAAGGGCCTTTTCTACTGGGTAGAATTGGAGAGAAAGTTTGGGAAAATGAGCTACCCTGGAGGAGATTGGATGTGTGGTGCTTGCCAGCATGTTAATTTCAAGAGGAGGGATACATGCCAACGTTGTGGCTACCCCAAGTTTGGAGGGCATGACCCTTCATCTTATGGAAGCATCAATAGGAACACTGATGCATTGGCAGGGGACTGGTTTTGCACTGTCATGAACTGTGGAGCTCACAACTATGCCAGCCGATCAAGCTGCTTTAAATGTGGTACACTCAAAGATGATTATGCAGGCTCTGGAGGATATGGATCTGGTTGCAGTTTCCCTCCCGGATGGAAGCCTGGGGATTGGATTTGCTCTAGTTTTCTCAGTCGCATTAGTTCAATAATTGCAACATGGAATGCTAATAAAGAACCTGTGAACTCTGTTATAACTTAG 702 0.4459 MNLTISVVEYILISEGREDKLVLEMAKHRNTITGKEIARLLVHDQLSPTLTLSHRWGFGDIGFHRSLPPRLFPWICSSPIMHRNQEKKGLFYWVELERKFGKMSYPGGDWMCGACQHVNFKRRDTCQRCGYPKFGGHDPSSYGSINRNTDALAGDWFCTVMNCGAHNYASRSSCFKCGTLKDDYAGSGGYGSGCSFPPGWKPGDWICSSFLSRISSIIATWNANKEPVNSVIT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1070 233 SUPERFAMILY Ran binding protein zinc finger-like 149 183 IPR036443 -
Sto12g1070 233 ProSitePatterns Zinc finger RanBP2-type signature. 110 129 IPR001876 -
Sto12g1070 233 PANTHER ZINC FINGER PROTEIN 81 211 - -
Sto12g1070 233 Gene3D - 102 135 - -
Sto12g1070 233 Gene3D - 145 183 - -
Sto12g1070 233 SUPERFAMILY Ran binding protein zinc finger-like 102 136 IPR036443 -
Sto12g1070 233 SMART zf_4 154 180 IPR001876 -
Sto12g1070 233 SMART zf_4 108 132 IPR001876 -
Sto12g1070 233 ProSiteProfiles Zinc finger RanBP2 type profile. 106 135 IPR001876 -
Sto12g1070 233 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 81 211 - -
Sto12g1070 233 ProSitePatterns Zinc finger RanBP2-type signature. 156 177 IPR001876 -
Sto12g1070 233 Pfam Zn-finger in Ran binding protein and others 153 181 IPR001876 -
Sto12g1070 233 ProSiteProfiles Zinc finger RanBP2 type profile. 152 183 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1070 Sto-Chr12 6716134 6718981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1070 - - gmx:100792208 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1070 12 6716134 6718981 Sto3g1765 3 13775309 13778588 CCT