Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0894 ATGGTGGCGGACAAGACCAAGAAGTTGAAAGTTGAAGAGATTAAGGAGGAACTTGACGGAGAGCTCGTCCTCTCCATTGAGAAGTTGCAGGAGATTCAAGACGAGCTCGAAAAGATCAATGAGGAGGCAAGTGATAAAGTCCTCGAAATAGAGCAGAAGTACAACGAGGTTCGAAAGCCAGTTTATGACAGGCGCAATGAGATTGTCAAATCTATTCCTGACTTTTGGACGAAGGCTTTTTTGAGCCACCCTGCTCTTGGTGAGCTTCTTAACAAGGAAGATCAACAGatatttaagtATTTGAGTTCTTTGGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCTGTTTCTTTTAATTTCAATCCCAATCCATATTTTGAGGATACAAAGCTTACGAAGACTTTTACTTTCCTTGATGAGGGAACAACAAAGATAACTGCTACACCTATAAAATGGAAAGAGGGCAAGGGCTTACCCAATGGAGTCAGTCATGAGAAGAAAGGAAACAAGAGGGCTCCTGTTGATATCAGTTTCTTTAGTTGGTTTAGTGACACTGAGCAGAGAGATGAGATGGATGACATTCATGATGAGGTATAG 603 0.408 MVADKTKKLKVEEIKEELDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEVRKPVYDRRNEIVKSIPDFWTKAFLSHPALGELLNKEDQQIFKYLSSLEVEDFKDVKSGYSVSFNFNPNPYFEDTKLTKTFTFLDEGTTKITATPIKWKEGKGLPNGVSHEKKGNKRAPVDISFFSWFSDTEQRDEMDDIHDEV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0894 200 Coils Coil 15 56 - -
Sto12g0894 200 Pfam Nucleosome assembly protein (NAP) 70 195 IPR002164 GO:0005634|GO:0006334
Sto12g0894 200 Pfam Nucleosome assembly protein (NAP) 26 70 IPR002164 GO:0005634|GO:0006334
Sto12g0894 200 Gene3D Nucleosome assembly protein 73 200 - -
Sto12g0894 200 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 200 IPR002164 GO:0005634|GO:0006334
Sto12g0894 200 Gene3D - 1 72 - -
Sto12g0894 200 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 200 - -
Sto12g0894 200 SUPERFAMILY NAP-like 11 192 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0894 Sto-Chr12 5571413 5573636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0894 K11290 - gmx:100793432 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0894 12 5571413 5573636 Sto3g1542 3 11413460 11419325 CCT
Sto3g1542 3 11413460 11419325 Sto12g0894 12 5571413 5573636 ECH
Sto12g0894 12 5571413 5573636 Sto12g0894 12 5571413 5573636 ECH