Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0849 ATGAAGAGAGGCAAATTAGAGAAATTAGATACGTTTGTGGCATTAAGCAGGCAAAGATCCGTTCAGATTCTGATCGGAATTGGCCTTTTGTATTTGCTTTTGGTCACAGTGGAAATCCCCTTCGTATTCAAGACTGGATTCAGTTCTGTTTCTCAGGAGTTCTTGACTCGCCCTTCTAGACTCGAGAGCGAGGAGGACTTGGAAGAAAGAGAAGCCCCTTCTCGCCCGCTTGAAAAAGTTTCCTTAAACGCCTACCAGCCGATTTCCAGCCGACTCACTCGCCACAAGATTCTCTCGGGCTTGATCTTCGATAACAGTACATTTGATTCGCCGGGCAAGGACGAGCTTTACATGTCGGCCAAGAGTGCTTGGGAAGTGGGGAGGAAGCTTTGGGGAGAGCTAGAATCGGGGAAATCGCGAGCCGCCGCCATGAAATCCGAGAACCGATCGGATTCGTGCCCGCCTTCGATTTCGTTGTCCGGGTCGGAGTTTTTGGCCCATGGGCGAGTCATGTTCATTCCTTGTGGACTGACATTGGGGTCCCACGTTACGGTTGTGGCGAAACCGTTGGCGGCGCACGCAGAGTTCGAACCCAAGATATCGATGGTGAAGGATGATGATGAACCAGTGATGGTGTCTCAGTTCATGATGGAGTTGCAGGGTTTAAAGACAGTGGACGGCGAGGAACCCCCTAGGATTTTGCATTTCAATCCCAGATTGAAAGGAGATTGGAGTGGGAAGCCTGTGATTGAGCTAAATACCTGTTACCGAATGCAGTGGGGTTCGGCGCTGCGGTGTGATGGCTGGAAATCCAAGGCTGATGATGAGACTGTTGATGGTCTGGCGAAGTGTGAGAAGTGGATTCGAGATGATGACAATCATGCAGAGGAGACAAAGGCTAGATGGTGGTTGAATAGATTGATAGGCCGTACTAAAAAAGTATCATTGGATTGGCCATTCCCATTTTCTGAGGACAAGCTATTTGTTCTGACTCTCAGTGCTGGATTGGAGGGCTACCATGTTAATGTTGATGGGAGGCATGTGGCCTCATTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGACTTTATTTGAGTGGGGACATTGATGTCCACTCTGTATTTGCTGCCTCTTTGCCTTCATCACATCCAAGTTTTGCCCCACAGAAGCATCTTGACTGGTCAAGCAGATGGCAAGCTCCACCGCTTCCTGACTCTGATGTTGAATTGTTCATCGGCATTCTTTCTGCTGGGAATCATTTTGCTGAGCGAATGGCTGTAAGGAAATCATGGATGCAGCATAGGTTTATCAAATCTTCAAAAGTGGTGGCTCGTTTCTTTGTAGCTCCGCATCCAAGAAAAGAAGTTAATGCAGAGTTAAAGAAGGAAGCAGAATTTTTTGGTGATATTGTTGTAGTGCCTTACATGGATAACTATGACCTTGTTGTCCTGAAAACAGTGGCCATCTGTGAATATGGGGTTCACACAGTTTCTGCCAAGTATATCATGAAGGGTGATGATGACACTTTTGTAAGAGTGGATGCTGTTTTGAATTTAGCAAGGAGCATTCCAGACGATAGGAGCTTTTATATTGGGAACATCAATTACTACCACAAGCCTTTGCGCTATGGTAAATGGGCTGTGACATATGAGgAATGGCCAGAAGAGGATTATCCACCATATGCTAATGGACCGGGTTATATATTGTCTTCTGATATTGCACGCCACGTTGTATCTGAATTTGAAGGGCATAAATTAAGGTTATTCAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAAGACGAAACCAGTAGAGTATTTGCATAGCTTAAAGTTTTGCCAGTTTGGTTGCATAGAAGAGTATTACACAGCCCATTACCAATCGCCAAGGCAGATGATGTGTATGTGGGATAAATTGCAAAGGCAGACAAGGCCTCAGTGCTGCAATATGAGATGA 1977 0.4588 MKRGKLEKLDTFVALSRQRSVQILIGIGLLYLLLVTVEIPFVFKTGFSSVSQEFLTRPSRLESEEDLEEREAPSRPLEKVSLNAYQPISSRLTRHKILSGLIFDNSTFDSPGKDELYMSAKSAWEVGRKLWGELESGKSRAAAMKSENRSDSCPPSISLSGSEFLAHGRVMFIPCGLTLGSHVTVVAKPLAAHAEFEPKISMVKDDDEPVMVSQFMMELQGLKTVDGEEPPRILHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADDETVDGLAKCEKWIRDDDNHAEETKARWWLNRLIGRTKKVSLDWPFPFSEDKLFVLTLSAGLEGYHVNVDGRHVASFPYRTGFTLEDATGLYLSGDIDVHSVFAASLPSSHPSFAPQKHLDWSSRWQAPPLPDSDVELFIGILSAGNHFAERMAVRKSWMQHRFIKSSKVVARFFVAPHPRKEVNAELKKEAEFFGDIVVVPYMDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVLNLARSIPDDRSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARHVVSEFEGHKLRLFKMEDVSMGMWVEQFNKTKPVEYLHSLKFCQFGCIEEYYTAHYQSPRQMMCMWDKLQRQTRPQCCNMR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0849 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 170 377 IPR013320 -
Sto12g0849 658 Gene3D - 406 655 - -
Sto12g0849 658 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 169 379 IPR001079 GO:0030246
Sto12g0849 658 Pfam Galactosyltransferase 425 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto12g0849 658 SMART Gal_bind_lectin_2 173 378 IPR001079 GO:0030246
Sto12g0849 658 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 9 658 - -
Sto12g0849 658 Pfam Galactoside-binding lectin 170 377 IPR001079 GO:0030246
Sto12g0849 658 Gene3D - 169 377 - -
Sto12g0849 658 CDD GLECT 172 377 IPR001079 GO:0030246
Sto12g0849 658 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 9 658 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0849 Sto-Chr12 5326076 5329204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0849 5 658 Glycosyltransferase AT1G74800 66.319 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0849 K20843 - zju:107406201 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1488 3 10970408 10973606 Sto12g0849 12 5326076 5329204 CCT
Sto3g1488 3 10970408 10973606 Sto12g0849 12 5326076 5329204 ECH
Sto12g0849 12 5326076 5329204 Sto12g0849 12 5326076 5329204 ECH