Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0838 ATGGCTCCGTCTTCAGCTCCAGCTCATAACCTCAAGCAACGAGTATTCACTTGCCTCACCAAGCTCTCCGACCGCGATACGCAGTCTCTTGCTGCTACTGAACTCGAGTCCATTGCTCGGAGCCTCGATGCCAACTCCGTACCAGTGTTCCTCTCCTGCATACACTCCACCAATGCCTCAGACAAATCACCGGTTCGCAAACAATGCGTGCACCTCATGGAGGTGCTTTCTGAAACGCACGGCAATACGCTCTCTCCCTATCTTTCCAAAATCCTTTCTCACATAGTTCGTCGGCTCCGTGACCCGGACTCGGCGGTTCGGTCCGCTTGCGTGAATTCTGTTTCGGCATTGTCCGCTCGCATCACGAAACAAccgttttcttcttttctgaaGCCGTTGACTGAGGCGCTGTTCACTGAGCAGGACCAGAATTCGCAGTTAGGCGCGGCGCTTTGTTTGAGTTCTGCCATTGATGCAGCCCCTGACCCGGACCCAGCCAGACTGGCGAAGCTTTTGCCGAGGTTCGAGAAGTTGTTGAAGAGCGAGAGCTTTAAGGCGAAGCCGGCGCTGTTGACGCTTATCGGAAGTGTTATTGATGCCGGTGCGGTCTTGAGTCACGACGCTTTGAGAAATTTGGTTCCATGCGTGGTGGAATTCTTGAGCAACAACGATTGGGCGGCAAGGAAGGCTTCGGCCGAGGCGTTGGTGAAGTTAGCAATAGTGGAGAGAGATATGTTATCAGAATTCAAGGCTGGATGTTTGAAGGTTTTCGAGAATCGTCGATTCGACCAGGTAAAGATAGTTCGGGAAGTTATGAATCAGTTGTGTGAAGCATGGAAGCAGATTCCTGATGTTTCGGATGAATTCTCTCCACCTCCTAAATCGCAATCTTCTTCCAAAGAAAATGCAAGTGATGGGCGCTATCCGCCAGTCTCACAGAATTCATGTAGTCCTGGTTCTGTAATGCCTCGATTGTGGAAGAAATCCATTCCAGCTAGCAGATCAACCCCAGATAGTTCTTCTGCTAGCAATGCTAAGAAGATAAGTTCTCTAAGTGGTGACAATAGATTGAGTTCAGGTGTGCTGCGAAAGCTAAACCACAAGAATTGGGATCTTCAAATTGCTGAGCCAAAAACTCCCCCTGCAACAGTTGCTTATCAGGGTTATCTTGAAGAGAGAAATGAAACTATACccgaaaaaaggaaaaaggagaaaagCAACTTCTCAAAGCCAGAACTGAAACGGGCTGTTCTCAGTAAAAAGCCTGATGAAAAAATGCGCAAGGTTGGTGGGTCAAAAACTGGATCTCGTGTAGTTCCATGTCATGAAGAGAGCCAAGACTCAGCTGCTATCAGTAATGTCACTAAAGATTTCCATAGGAACAACAAAGAGTGCGAAGAGTTAACATTGATCCGTAGCCAGTTATTGCAAATTGAAAAGCAGCAGTCAAATCTACTTGATCTTCTTGAGAGATTCATGTATAGCTCACAAAATGGAATGCGGTCTTTAGAGACTCGTGTACATGGCCTTGAGTTGGCATTGGAAGATATCTCTTATGATTTGGCTGTATCAAGTAGAAGAGTGACTTATTCTGATGCTCCTGGGAATTCATGTTGCTTGCTGCCTGGTGCAGAATTTTTGAGCTCTAAATTCTGGAGGAAACCACAGGGCCAGTTTTCATACTCCCAGTTCTCTACATCTGGTGGCACCCCCTCACTTGCTACCAAGCAGAACAGAACTGAAAGGACAGGCAATATTGATACTAAGTTGACAAACCATAAGTTTAGGCTCCATGGTGATGGAGGATTCATCACAAATCCACTGGCAGAAGTTCATACAAAGTTGGGAGATAAAAGACATTGTACATGA 1869 0.458 MAPSSAPAHNLKQRVFTCLTKLSDRDTQSLAATELESIARSLDANSVPVFLSCIHSTNASDKSPVRKQCVHLMEVLSETHGNTLSPYLSKILSHIVRRLRDPDSAVRSACVNSVSALSARITKQPFSSFLKPLTEALFTEQDQNSQLGAALCLSSAIDAAPDPDPARLAKLLPRFEKLLKSESFKAKPALLTLIGSVIDAGAVLSHDALRNLVPCVVEFLSNNDWAARKASAEALVKLAIVERDMLSEFKAGCLKVFENRRFDQVKIVREVMNQLCEAWKQIPDVSDEFSPPPKSQSSSKENASDGRYPPVSQNSCSPGSVMPRLWKKSIPASRSTPDSSSASNAKKISSLSGDNRLSSGVLRKLNHKNWDLQIAEPKTPPATVAYQGYLEERNETIPEKRKKEKSNFSKPELKRAVLSKKPDEKMRKVGGSKTGSRVVPCHEESQDSAAISNVTKDFHRNNKECEELTLIRSQLLQIEKQQSNLLDLLERFMYSSQNGMRSLETRVHGLELALEDISYDLAVSSRRVTYSDAPGNSCCLLPGAEFLSSKFWRKPQGQFSYSQFSTSGGTPSLATKQNRTERTGNIDTKLTNHKFRLHGDGGFITNPLAEVHTKLGDKRHCT 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0838 622 MobiDBLite consensus disorder prediction 290 320 - -
Sto12g0838 622 MobiDBLite consensus disorder prediction 421 444 - -
Sto12g0838 622 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 8 614 - -
Sto12g0838 622 MobiDBLite consensus disorder prediction 332 356 - -
Sto12g0838 622 MobiDBLite consensus disorder prediction 286 356 - -
Sto12g0838 622 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 8 614 IPR033337 GO:0005874|GO:0008017
Sto12g0838 622 Gene3D - 5 375 IPR011989 -
Sto12g0838 622 SUPERFAMILY ARM repeat 11 296 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0838 Sto-Chr12 5255901 5258310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0838 - - gmx:100789197 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1477 3 10850371 10872512 Sto12g0838 12 5255901 5258310 CCT
Sto3g1477 3 10850371 10872512 Sto12g0838 12 5255901 5258310 ECH
Sto12g0838 12 5255901 5258310 Sto12g0838 12 5255901 5258310 ECH