Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0761 ATGAAGGCAACGATAAGGTATTTAGCTGGAATTGCAGGCCCTAGTGGCTTTGGCTCTAATTCTACCGCTGAGCAAGTCACCCAACAATATTCTTCTTCCATGCCTCCTTCTCATCTCACCGCTCTCATTACTGGGGCGAGTTCTGGTATTGGAGCTGAAACGGCTAGAGTGCTAGCGATGAGAGGAGTGAGAGTGGTGATAGGTGCGAGGGACTTGAAGAAGGCAATGGAAGTGAAAGAGAATATTCTGAAACAGAGTCCAAATTCAGAGGTTGTATTGTTGGAGATTGATCTCAGCTCTTTTGCCTCTGTACACAGATTTTGTTCTGAGTTTTTGGCTCTACAACTTCCTCTTAATATTCTCATAAATAATGCTGGCATGTTCTCTCCGACTTTGGAGTTCTCCGAAGAGAAAATTGAGATGACATTTGCTACTAATTATTTAGGACATTTTTTGTTAACAGAAATGCTACTAGAGAAAATGATAGAAACGGCAGAGAAGACGGGTATTCAAGGAAGAATAATAAACGTGTCTTCAATGATCCATGGTTGGGTGAACAGAGATGCTTTTCTATTCAATGACATGCTCAATGGAACAAACTATAACGGCACACGGGCATATGCTCATTCAAAATTGGCCAAGCTTTTGCATGCCAAGGAAATGGCCAAACAACTAAAGGCAAGAAATGCAAATGTAACTATCAATGCCGTCCATCCGGGAATTGTGAAGACGGGAATTATGAGAGCTCACAAGAGTTTAATAACAGATTCCTTGTTTTTCATTGCATCCAAGTTACTCAAATCCATATCTCAGGTATTTTCAGGGTGCATCAACGGCGTGTTATGTTGCTCTGAGCCCACAAACAGAAGGAGTGAGTGGGAAATACTTCTTAGACTGTAA 900 0.4156 MKATIRYLAGIAGPSGFGSNSTAEQVTQQYSSSMPPSHLTALITGASSGIGAETARVLAMRGVRVVIGARDLKKAMEVKENILKQSPNSEVVLLEIDLSSFASVHRFCSEFLALQLPLNILINNAGMFSPTLEFSEEKIEMTFATNYLGHFLLTEMLLEKMIETAEKTGIQGRIINVSSMIHGWVNRDAFLFNDMLNGTNYNGTRAYAHSKLAKLLHAKEMAKQLKARNANVTINAVHPGIVKTGIMRAHKSLITDSLFFIASKLLKSISQVFSGCINGVLCCSEPTNRRSEWEILLRL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0761 299 PANTHER RETINOL DEHYDROGENASE 4 276 - -
Sto12g0761 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 127 IPR002347 -
Sto12g0761 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 IPR002347 -
Sto12g0761 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 207 226 IPR002347 -
Sto12g0761 299 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 276 - -
Sto12g0761 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 253 IPR036291 -
Sto12g0761 299 Pfam short chain dehydrogenase 40 181 IPR002347 -
Sto12g0761 299 Gene3D - 36 296 - -
Sto12g0761 299 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Sto12g0761 299 PRINTS Glucose/ribitol dehydrogenase family signature 116 127 IPR002347 -
Sto12g0761 299 PRINTS Glucose/ribitol dehydrogenase family signature 166 182 IPR002347 -
Sto12g0761 299 PRINTS Glucose/ribitol dehydrogenase family signature 207 226 IPR002347 -
Sto12g0761 299 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0761 Sto-Chr12 4758132 4761479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0761 19 249 Acyl Lipid Metabolism Gene Families AT1G63380 29.461 9.78e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0761 - K11153 gmx:100819058 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1385 3 10101968 10106172 Sto12g0761 12 4758132 4761479 CCT
Sto12g0761 12 4758132 4761479 Sto12g0761 12 4758132 4761479 ECH