Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0747 ATGGCCTCAGCTTCGCAAAAGGCGACGCCTCCTCCTTCTTTCTGTGCCCCTGCCGATTCAGCTCCCGTTTCGCGACTCGCCGCGCCGTCCGCTGTTGCCGCCAATGTCGTCGCTTTGATCAGCCCCGTCGATTCGCTTCCCGAACCGTCCACTAATGCTCCTACTACCAAAGGAATCACTGCAATGCCAAGGGCCCAATCAAGCCACCCTTTGGACCCTTTGTCTGCTGCCGAGATCGCTGTGGCTGTGGCAACTGTGAGAGCAGCTGGAGCCACACCTGAGCTTAGAGATGCTATGCGCTTTATTGAAGTTGTTCTTCGGGAACCAGATAAGCATGTTGTTGCTCTGGCAGATGCATATTTCTTTCCCCCCTTCCAACCATCATTACTTCCTAAAACTAAAGGAGGACCTATTTTTCCCATTAAACTTCCTCCAAGACGTGCCAGACTGGTTGTTTATAATAAGAAGTCAAATCAGACTAGTGTATGGATTGTTGAATTATCAGAAGTACATGCAGTAACTCGAGGTGGTCATCACCGGGGAAAAGTAATTTCATCGCAGGTTATTCCAGATGTTCAGCCTCCAATGGATGCTGTGGAGTATGCAGAATGCGAAGCTGTTGTTAAAGATTTTCCACCATTTAGAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTTGGTTATCATAGTGAAGCTGATTCTCCAAGCCGAAGACTGGCTAAGCCACTAATATTTTGTCGAAGTGAGAGTGACTGCCCAATGGAAAATGGCTATGCACGCCCAGTTGAGGGCATCTATGTGCTTGTTGACATGCAAAACATGGTGGTGATTGAATTTGAAGACCGCAAACTTGTTCCTCTACCTCCAGTTGATCCCTTGAGGAACTATACTGCTGGTGAAACAAGAGGTGGTACTGATAGAAGTGATGTAAAACCCTTGCAAATTCTTCAGCCTGAAGGTCCAAGCTTTCGTGTTAATGGTCATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGGTTTACACCCAGAGAAGGTTTGGTCATATATTCTGTTGCATATGTTGATGGTAGTAGGGGGCGAAGACCTGTTGCACATAGGTTGAGTTTTGTGGAAATGGTTGTGCCTTATGGAGATCCAAATGAGCCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCCCATTCTCTCAAGAAGGGATGTGATTGTTTGGGcttcattaaatattttgatGCCCACTTCACAAATTTCACTGGAGGAGTTGAGACAATTGAAAATTGTGTTTGTTTACATGAAGAGGATCATGGAATCCTGTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTTCGAAGGTCAAGAAGACTTTCAGTATCTTTTATTTGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGGAAAATCGAAGCTGAGGTTAAGCTAACTGGAATTCTCAGTTTAGGAGCCTTGCTACCTGGAGAGACTCGGAAATATGGTACCATGATTGCTCCAGGTCTATACGCCCCTGTCCATCAACACTTTTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATGTCAAAGTTGAGGAACCTGGCGAGAATAATGTTCACAATAATGCATTCTATGCTGAGGAGACTCTGCTCAAATCTGAATTGGAAGCCATGCGCGATTGCAATCCTTCTACTGCTCGACATTGGATTGTGAGGAACACAAGAACAGGAAATAGAACTGGACAATTAACTGGCTACAAGCTGGTACCTGGCTCAAACTGCTTACCATTAGCAGGTTCTGAAGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTTACACCACATTCACGCGATGAGATGTTCCCCGGAGGAGAATTCCCTAATCAAAATCCCCGTATAGATGAAGGACTAGttacatgggtgaagcagaacaGATCTTTGGAAGAAACTGACATAGTTCTatgGTATGTTTTTGGAATCACTCATGTCCCCCGGCTAGAAGACTGGCCTGTTATGCCAGTGGAGCGCATTGGTTTTATGCTTATGCCTCATGGATTCTTCAATTGCTCCCCTGCCGTAGACGTGCCGCCTAATCCATGTGAAATGGAATCTAAAGATAATGAGAGCAAAGACACTGGGGTTCCCAAGCCTATTCAGAGTGGATTGGTGTCCAAGCTTTAG 2298 0.4439 MASASQKATPPPSFCAPADSAPVSRLAAPSAVAANVVALISPVDSLPEPSTNAPTTKGITAMPRAQSSHPLDPLSAAEIAVAVATVRAAGATPELRDAMRFIEVVLREPDKHVVALADAYFFPPFQPSLLPKTKGGPIFPIKLPPRRARLVVYNKKSNQTSVWIVELSEVHAVTRGGHHRGKVISSQVIPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDAWCVGYHSEADSPSRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTAGETRGGTDRSDVKPLQILQPEGPSFRVNGHYVEWQKWNFRIGFTPREGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGFIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALLPGETRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVKVEEPGENNVHNNAFYAEETLLKSELEAMRDCNPSTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPHSRDEMFPGGEFPNQNPRIDEGLVTWVKQNRSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNPCEMESKDNESKDTGVPKPIQSGLVSKL 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0747 765 SUPERFAMILY Amine oxidase N-terminal region 193 310 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 Gene3D - 199 301 - -
Sto12g0747 765 MobiDBLite consensus disorder prediction 1 20 - -
Sto12g0747 765 Pfam Copper amine oxidase, N3 domain 194 297 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 Gene3D - 53 196 - -
Sto12g0747 765 Pfam Copper amine oxidase, enzyme domain 323 731 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 Gene3D Copper amine oxidase, catalytic domain 309 736 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 MobiDBLite consensus disorder prediction 48 67 - -
Sto12g0747 765 MobiDBLite consensus disorder prediction 48 63 - -
Sto12g0747 765 PANTHER AMINE OXIDASE 1 761 - -
Sto12g0747 765 SUPERFAMILY Amine oxidase N-terminal region 67 195 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 PANTHER COPPER AMINE OXIDASE 1 761 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 SUPERFAMILY Amine oxidase catalytic domain 317 736 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Sto12g0747 765 MobiDBLite consensus disorder prediction 737 765 - -
Sto12g0747 765 Pfam Copper amine oxidase, N2 domain 69 168 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0747 Sto-Chr12 4663708 4669698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0747 K00276 - zju:107418311 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2023 11 19030892 19032957 Sto12g0747 12 4663708 4669698 CCT
Sto12g0747 12 4663708 4669698 Sto12g0747 12 4663708 4669698 ECH