Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2023 ATGATGGGAATCGGATTCTCATCCTTCGACGCCGACCGGAATGGTTCTCAGATGATTGTGCCTTCGAAACCCGCTCTGGGGGATTTGCCGGAGAGCTGCGTGGCTTTGATTCTCGAGTATATGGATCCCCCCCAGATTTGTAAGCTGTCCAAGTTGAATCGGACTTTTCGCAGTGCTTCGTGGGCTGATTTCGTGTGGGAATCCAAGTTGCCTCCCAATTACGATGCTCTTGTCAGGAGGATTTTCGAGGGTTTTCCCGGCAATTTGGGCAAGAGGGGGATTTATGCGAGGTTGTGTCGCCCTAATACTTTTGATGAAGGCAATAAGAAAGTTTGGCTGGATAGAAGCACGGGTAAGCTTTGTTTGTCCATATCATCCAAGGGACTATCAATAACGGGGATTGATGATCGTAGATATTGGAATTATATCCCTACTGAAGAATCTAGATTCAACACCATTGCATATCTTCAGCAAATCTGGTGGTTTGAAGTTGATGGTGAAGTTGAGTTCCCATTTCCAGCAGGAACATATAGCCTATTCTTCAGATTACATTTAGGGAAAGCCTCCAAGAGATTTGGTCGAAGAGTCTGCAATACTGAGCATGTCCATGGGTGGGACAtaaagcctgcccgattccagCTTTGGACTTCTGATGGACAATACGTTGCATCCCAGTGTTTCCTGAAAGAACCAGGGAATTGGGTTTTTTACCATGCAGGCGATTTTGTGGTTCAGAATGGGAATGAAtccacaaaaattaaattctctATGACTCAAATTGATTGCACTCACACCAAAGGCGGTCTCTCTTTAGATTCTGTGCTGATATATCCAAGTGAGTTCAGAAAGGTTAAACCATTTTTGAGATCTTAA 873 0.4261 MMGIGFSSFDADRNGSQMIVPSKPALGDLPESCVALILEYMDPPQICKLSKLNRTFRSASWADFVWESKLPPNYDALVRRIFEGFPGNLGKRGIYARLCRPNTFDEGNKKVWLDRSTGKLCLSISSKGLSITGIDDRRYWNYIPTEESRFNTIAYLQQIWWFEVDGEVEFPFPAGTYSLFFRLHLGKASKRFGRRVCNTEHVHGWDIKPARFQLWTSDGQYVASQCFLKEPGNWVFYHAGDFVVQNGNESTKIKFSMTQIDCTHTKGGLSLDSVLIYPSEFRKVKPFLRS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2023 290 SMART fbox_2 29 68 IPR001810 GO:0005515
Sto11g2023 290 PANTHER F-BOX PROTEIN PP2-A15 2 285 - -
Sto11g2023 290 PANTHER F-BOX PROTEIN PP2-A12 2 285 - -
Sto11g2023 290 Pfam Phloem protein 2 120 278 IPR025886 -
Sto11g2023 290 Pfam F-box domain 28 59 IPR001810 GO:0005515
Sto11g2023 290 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Sto11g2023 290 SUPERFAMILY F-box domain 21 99 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2023 Sto-Chr11 19030892 19032957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2023 - - gmx:100788842 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2023 11 19030892 19032957 Sto12g0747 12 4663708 4669698 CCT