Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto12g0743 | ATGGATCCAAATCCAGGAAGCTTCCCTATTCTCTCTTACGTGATGAGTCGACTCCCTTCTCTAGGGCCTAGGCCTTCCGCAGCCCCTGAATTTGATATCGAACAACCTCACCCTCACCGTCAACCCGAAATTGTGGACCAAATGCCTCATCTTACTGACCCGAAAGTCTTGGCCGCAATGACCCGCGCAATCGCCGATGTCGCACAGACCCGATCCGTACTCCAGCTCCTAGGTGAGCGACCCGATCATGAGGCCGTTGATAATGCAAAGGCCAAGCTTGCGGACATCGAAGCCCTTTTATCCAAACAACTGGAAGAGATTGTGCTCTCACCCAGGCCCGAGAATATCGACATCCTTCAGTGGCGAGCTCATCAGGCAGAAAGAGAGAAGGAGTGTAGGGAATTGGCGGAGAAGGAGAAGCGTGTATACAAGTCAATGATACAGTTGGAAGAGATGCACGTTGCGTATGAGAAACTGCTGAAGGACGCAGAGAAGAGGCTGGTAGAAATTTACGATTCTGCTGGGGAAGGAGCAGAAGATGCCGAGGAAGACAAGCCTGTTCAGGAGGAGATCAATGAAGAAGTAGTGGGGATACTACAGGAGGCACATGGAAATGGGATGGAGCGGGTGGATCTTTCAGGACGGCGGTTGAGGTTGCTGCCTGAGGCCTTTGGGCGGATTCCTGGCTTGGTCGTGCTTGATCTTTCAAGCAATCAGCTGGAGGCCATTCCTGACTCAATAGCTGGATTGCATAGTCTTGAGGAGCTTAATGTCTCTTCAAATCTTTTGGAGTCACTTCCAGATTCAATTGGTTTGTTACAAAAGTTGAAATTCCTAAATGTTTCTGGGAACAAGCTGAATGCCCTGCCTGATTCCATCTCTCACTGCAGGTCATTGGTGGAGCTGGATGCAAGCTTCAACAGTCTGACATATTTGCCAACACACATTGGATATGAATTGATAAATTTACATAAGCTCTCCATTCAGTTGAACAAGATTCGTTCTCTTCCCTCGTCTGTTTGTGAAATGAGGTCCTTGCGGTACCTAGATGCTCATTTTAATGAGCTACATGGGCTTCCTATTGCAATTGGGAAATTGACTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCAGTGACCTTAGAGAACTTCCTGAGACATTTGGTGATCTGACTAACCTCAGGGAACTGGATCTCAGCAACAATCAGATTCATGCGCTTCCTGATACGTTTGGTCGCCTTGACTATTTGGTCAAGCTCAACTTGGAACAGAACCCTCTGGAATTGCCACCAATGGAAATTGTAAATGAGGGTGTTGAAGCCGTAAAGACTTATATGGCTAAGAGGTGGCTTGATATATTGGTCGAGGAAGAAAGGAAAAGCATGCATGAAATGCAAGAACAAGCGCAAGCTGGCTGGTTAACTCGAACCACCTCCTGGTTGAAGGGTTACGTATCTGGCGTTTCTGGAAATGTTACTGAGTATCTTGGGTCTGCCATAGGAACTCCTAAAGCTCCCAAAGATCCTTATCTTGATCAGCAGCTCTGA | 1548 | 0.4729 | MDPNPGSFPILSYVMSRLPSLGPRPSAAPEFDIEQPHPHRQPEIVDQMPHLTDPKVLAAMTRAIADVAQTRSVLQLLGERPDHEAVDNAKAKLADIEALLSKQLEEIVLSPRPENIDILQWRAHQAEREKECRELAEKEKRVYKSMIQLEEMHVAYEKLLKDAEKRLVEIYDSAGEGAEDAEEDKPVQEEINEEVVGILQEAHGNGMERVDLSGRRLRLLPEAFGRIPGLVVLDLSSNQLEAIPDSIAGLHSLEELNVSSNLLESLPDSIGLLQKLKFLNVSGNKLNALPDSISHCRSLVELDASFNSLTYLPTHIGYELINLHKLSIQLNKIRSLPSSVCEMRSLRYLDAHFNELHGLPIAIGKLTNLEVLNLSSNFSDLRELPETFGDLTNLRELDLSNNQIHALPDTFGRLDYLVKLNLEQNPLELPPMEIVNEGVEAVKTYMAKRWLDILVEEERKSMHEMQEQAQAGWLTRTTSWLKGYVSGVSGNVTEYLGSAIGTPKAPKDPYLDQQL | 515 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto12g0743 | 515 | Gene3D | Ribonuclease Inhibitor | 317 | 448 | IPR032675 | - | |
| Sto12g0743 | 515 | Gene3D | Ribonuclease Inhibitor | 134 | 315 | IPR032675 | - | |
| Sto12g0743 | 515 | PRINTS | Leucine-rich repeat signature | 230 | 243 | - | - | |
| Sto12g0743 | 515 | PRINTS | Leucine-rich repeat signature | 391 | 404 | - | - | |
| Sto12g0743 | 515 | ProSiteProfiles | Leucine-rich repeat profile. | 393 | 414 | IPR001611 | GO:0005515 | |
| Sto12g0743 | 515 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 41 | 494 | - | - | |
| Sto12g0743 | 515 | Coils | Coil | 146 | 166 | - | - | |
| Sto12g0743 | 515 | Pfam | Leucine rich repeat | 385 | 427 | IPR001611 | GO:0005515 | |
| Sto12g0743 | 515 | Pfam | Leucine rich repeat | 219 | 263 | IPR001611 | GO:0005515 | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 250 | 272 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 297 | 319 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 227 | 249 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 273 | 296 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 320 | 343 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 391 | 414 | IPR003591 | - | |
| Sto12g0743 | 515 | SMART | LRR_typ_2 | 366 | 390 | IPR003591 | - | |
| Sto12g0743 | 515 | Coils | Coil | 86 | 106 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 273 | 292 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 366 | 387 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 227 | 246 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 296 | 315 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 250 | 269 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 391 | 410 | - | - | |
| Sto12g0743 | 515 | SMART | LRR_bac_2 | 320 | 339 | - | - | |
| Sto12g0743 | 515 | PANTHER | PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 | 41 | 494 | - | - | |
| Sto12g0743 | 515 | SUPERFAMILY | L domain-like | 207 | 427 | - | - | |
| Sto12g0743 | 515 | ProSiteProfiles | Leucine-rich repeat profile. | 252 | 273 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto12g0743 | Sto-Chr12 | 4637729 | 4641452 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto12g0743 | 237 | 435 | Receptor kinase-like Gene Family | AT5G20480 | 34.742 | 2.35e-18 | 87.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto12g0743 | - | - | gmx:100803823 | 733.406 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Sto3g1368 | 3 | 9924395 | 9927195 | Sto12g0743 | 12 | 4637729 | 4641452 | CCT | |
| Sto12g0743 | 12 | 4637729 | 4641452 | Sto12g0743 | 12 | 4637729 | 4641452 | ECH |