Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1863 aTGTACAGAGACCGAGGCGGTGTTGGGTCCAAGTCCGAGGTGGGTCCCGTCGATCGGAAGCGAATCAACGACGTCCTCGACAAGCAGCTCGAGCGGTCTTCGCCGTCCACTTCTAGGGTTATCAAGGCAAAGGATAGGTCGGCGCAATCGATTTTGCACGCTAAGGCTTTACCCTCTGATCATAGGGACTCTCGCACCTCTGCCTCCATCTCTAAGAACGCCAACGTTTCACATGAGGAATCTGAAACAGATAGTGAAGAATCAGATGTTAGTGGTTCTGATGGCGATGACACATCCTGGATCTCATGGTTTTGCAATTTGAGAGGAAACGAATTCTTTTGCGAAGTAGATGATGATTACATACAAGATGAATTCAACCTCTGTGGATTAAGTAGTCAAGTGCCTTACTATGATTATGCACTTGATTTAATTTTGGATGTTGAATCGTCCCATGGTGACATGTTCACAGAGGAACAAAATGAGTTAGTTGAATCGGCAGCGGAGATGCTTTATGGCCTGATTCATGCCCGGTACATCTTGACAGGCAAAGGAATGAGTGCTATGCTGGACAAGTACAAAAACTATGACTTTGGTAGATGTCCAAGAGTTTACTGCTCCGGGCAACCATGCCTTCCAGTTGGTCAGTCAGACATCCCTAGGTCAAGTACTGTAAAAACTTATTGCCCCAGGTGCGAAGACATTTATTACCCTCGATCCAAGTATCAAGACATTGATGGAGCTTATTTTGGAACTACATTTCCTCACCTGTTCTTGATGACGTATGGACAACTGAAGCCACAAAAGCCATTGCAGAGCTATGTTCCAAGAGTGTTTGGTTACAAAATTCACAAGCCACGAAACTAG 864 0.4537 MYRDRGGVGSKSEVGPVDRKRINDVLDKQLERSSPSTSRVIKAKDRSAQSILHAKALPSDHRDSRTSASISKNANVSHEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDEFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHARYILTGKGMSAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKTYCPRCEDIYYPRSKYQDIDGAYFGTTFPHLFLMTYGQLKPQKPLQSYVPRVFGYKIHKPRN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1863 287 PANTHER CASEIN KINASE II SUBUNIT BETA 1 284 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 92 196 IPR016149 GO:0005956|GO:0019887
Sto11g1863 287 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 284 - -
Sto11g1863 287 MobiDBLite consensus disorder prediction 1 95 - -
Sto11g1863 287 ProSitePatterns Casein kinase II regulatory subunit signature. 200 231 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 MobiDBLite consensus disorder prediction 29 44 - -
Sto11g1863 287 Pfam Casein kinase II regulatory subunit 99 281 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 Gene3D - 197 270 - -
Sto11g1863 287 SUPERFAMILY Casein kinase II beta subunit 97 285 IPR035991 GO:0005956|GO:0019887
Sto11g1863 287 SMART CK_II_beta_2 99 281 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 99 115 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 116 130 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 171 192 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 196 217 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 218 239 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 PRINTS Casein kinase II regulatory subunit family signature 245 262 IPR000704 GO:0005956|GO:0019887
Sto11g1863 287 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1863 Sto-Chr11 17395215 17398142 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1863 K03115 - gmx:100799304 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1863 11 17395215 17398142 Sto6g3469 6 40333521 40340238 CCT
Sto11g1863 11 17395215 17398142 Sto11g1863 11 17395215 17398142 ECH