Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1861 aTGTACAGAGAACGAGGAGGCGTCGTTGGATCCAAATCCGAAGTTTCTTCCGTTGATCGGAAGCGAATCAACGACGTCCTGGACAAGCAGCTGGAGCGATCCTCTCCTTCTACATCCAGAGCTATCAACGGCAAGGAAAGGTCGTCGCAATCGGTATTGACGGGCAAGCCACCCCATGATCACAGGGACCCTCGCTCTGCCCCCATCTCCTCCAAGAATATCAACGCTTCTGATGAGGAGTCTGAAACTGACAGTGAAGAGTCAGACGTTAGCGGTTCTGATGGAGATGACACATCTTGGATCTCGTGGTTCTGCAATCTGAGGGGAAATGAATTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTATGCGGATTAAGTAGTCAAGTACCTTACTATGATTATGCACTTGATTTAATTTTGGATGTTGAGTCCTCCCATGTCCCTTCATATTTCATAATGGCTACTTTTTGTTGTATGCTATGTAAAGGTGACATGTTCACAGAGGAACAAAATGAATTAATTGAATCAGCAGCGGAGATGCTTTATGGTCTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCTATGCTCGACAAGTACAAGAACTACGATTTTGGCCGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGTCAGTCAGACATTCCAAGGTCAAGTACTGTGAAAATATACTGCCCTCGGTGTGAAGATATTTACTACCCTCGGTCTAAGTATCAAGGAAATATTGATGGAGCTTATTTCGGAACTACATTTCCCCACCTCTTCCTGATGACTTACGGACAACTGAAGCCGCAGAAACCATCACAGGGCTACGTTCCAAGAGTTTTCGGTTTCAAACTTCATAAGCCATGA 909 0.4521 MYRERGGVVGSKSEVSSVDRKRINDVLDKQLERSSPSTSRAINGKERSSQSVLTGKPPHDHRDPRSAPISSKNINASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHVPSYFIMATFCCMLCKGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQGYVPRVFGFKLHKP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1861 302 SUPERFAMILY Casein kinase II beta subunit 97 301 IPR035991 GO:0005956|GO:0019887
Sto11g1861 302 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 301 - -
Sto11g1861 302 ProSitePatterns Casein kinase II regulatory subunit signature. 216 247 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 MobiDBLite consensus disorder prediction 15 29 - -
Sto11g1861 302 MobiDBLite consensus disorder prediction 1 95 - -
Sto11g1861 302 Pfam Casein kinase II regulatory subunit 99 298 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PANTHER CASEIN KINASE II SUBUNIT BETA 1 301 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 MobiDBLite consensus disorder prediction 30 55 - -
Sto11g1861 302 Gene3D - 213 287 - -
Sto11g1861 302 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 92 212 IPR016149 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 99 115 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 116 130 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 187 208 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 212 233 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 234 255 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 PRINTS Casein kinase II regulatory subunit family signature 262 279 IPR000704 GO:0005956|GO:0019887
Sto11g1861 302 SMART CK_II_beta_2 99 298 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1861 Sto-Chr11 17373254 17376291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1861 K03115 - gmx:100799304 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3469 6 40333521 40340238 Sto11g1861 11 17373254 17376291 CCT