Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1836 ATGTCTGCCGCTGTGTCCTCCACAACCCCTCATTTAGAGGAAGAGCTCAAAAACAAAGCAACAGACAACAACAACGTTGGTGGGGAACCAAACCAGCTCCCTTGCAGTGATGGTGCCAACTCTGATGTTGCCGAAGAAACTGAGCCAGAAGCAGATGATGACTCCAAGTTGGAATCTGACAGAGAACTGGATCTTGGCCCTCAGGTCACCCTCAAGGAACAGcttgaaaaagataaaGATGATGAAAGTTTGAGAAAATGGAAGAAGCAACTTCTGGGAAGTGTTGACATGTCTGTCGTTGGAGAAAGTAAAGACGCTGAAGTGAAGATATTGAGCCTCACTATTACAAGCCCAGACAGGCCCGACGTCACCCTGCCAATTCCATTTACTACTGATCCTAAGAAGAGTCTCTTCATCCTTAAGGAAGGAAGCCAATGCCGCATGAAATTCACTTTCACTGTCTCCAACAACATCGTTTCTGGTCTCCAATACACAAATGTTGTTTGGAAAACTGGCGTTAGAGTGGACAGCAGAAAAAAGATGTTGGGAACTTTTAGCCCCCAGCAGGAACCATATACATTTGAATTGGAAGAAGAAGCTATCCCTTCTGGCATGTTCGTTAGGGGAACCTATGCGGCAAGAACCAAGTTTGTAGATGACGATCGAAAATGCTACTTGGATGTCAGTTACTACTTTGAAATTCAGAAGAAATGGGCAACACCTCAATGA 729 0.4431 MSAAVSSTTPHLEEELKNKATDNNNVGGEPNQLPCSDGANSDVAEETEPEADDDSKLESDRELDLGPQVTLKEQLEKDKDDESLRKWKKQLLGSVDMSVVGESKDAEVKILSLTITSPDRPDVTLPIPFTTDPKKSLFILKEGSQCRMKFTFTVSNNIVSGLQYTNVVWKTGVRVDSRKKMLGTFSPQQEPYTFELEEEAIPSGMFVRGTYAARTKFVDDDRKCYLDVSYYFEIQKKWATPQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1836 242 MobiDBLite consensus disorder prediction 54 69 - -
Ssu9g1836 242 Gene3D Coagulation Factor XIII, subunit A, domain 1 61 240 IPR024792 -
Ssu9g1836 242 Pfam RHO protein GDP dissociation inhibitor 51 237 IPR000406 GO:0005094|GO:0005737
Ssu9g1836 242 MobiDBLite consensus disorder prediction 1 69 - -
Ssu9g1836 242 SUPERFAMILY E set domains 44 238 IPR014756 -
Ssu9g1836 242 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 7 240 - -
Ssu9g1836 242 PRINTS RHO protein GDP dissociation inhibitor signature 158 174 IPR000406 GO:0005094|GO:0005737
Ssu9g1836 242 PRINTS RHO protein GDP dissociation inhibitor signature 175 190 IPR000406 GO:0005094|GO:0005737
Ssu9g1836 242 PRINTS RHO protein GDP dissociation inhibitor signature 217 234 IPR000406 GO:0005094|GO:0005737
Ssu9g1836 242 MobiDBLite consensus disorder prediction 21 38 - -
Ssu9g1836 242 PANTHER RHO GDP-DISSOCIATION INHIBITOR 7 240 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1836 Ssu-Chr9 55747222 55748661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1836 K12462 - gmx:100797593 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1836 9 55747222 55748661 Ssu5g2349 5 66236678 66238032 PCT