Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1831 ATGTTAGACTGTGGGCCAGTGGTTGTGGCTGTGGTGCTATTCGTGCTGTTAATGCCGGGCTTGCTTTTTCAGGTACCTGGTCGCTCAAGGTGCCTGGAGTTTGGAAACTTTCAGACCAGTGGTGCTTCCATACTCGTTCACTCCCTCCTCTACTTTGGTCTCATTTGCCTATTCTTGCTCGCTATTAAGGGTGAAACAAGCAATCACGCAGAATATATAATGGCGGATTGGGGTCCAGTGGTGATGGCAGTTGTGCTGTTTGTGTTGCTAAGCCCTGGTCTTCTGTTTCAATTGCCAGGGAGGAGCAGAGTGGTGGAGTTTGGGAACATGCAAACAAGCGCGGTGTCCATCTTTGTCCACACAATCATCTTCTTTGGCCTCATTACCATCTTTCTTATTGCTATTGGTGTGCATATCTACTCGGGTTAA 429 0.4802 MLDCGPVVVAVVLFVLLMPGLLFQVPGRSRCLEFGNFQTSGASILVHSLLYFGLICLFLLAIKGETSNHAEYIMADWGPVVMAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSAVSIFVHTIIFFGLITIFLIAIGVHIYSG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1831 142 Pfam Protein of unknown function (DUF3339) 74 140 IPR021775 -
Ssu9g1831 142 Pfam Protein of unknown function (DUF3339) 1 63 IPR021775 -
Ssu9g1831 142 PANTHER PROTEIN, PUTATIVE-RELATED 74 142 - -
Ssu9g1831 142 PANTHER OS05G0103400 PROTEIN 74 142 IPR021775 -
Ssu9g1831 142 PANTHER OS05G0103400 PROTEIN 1 63 IPR021775 -
Ssu9g1831 142 PANTHER PROTEIN, PUTATIVE-RELATED 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1831 Ssu-Chr9 55696259 55702754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1831 - - hbr:110638161 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1831 9 55696259 55702754 Ssu5g2342 5 66087618 66090040 PCT