Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1821 atgaagaaccgGTATCCGGTGGCGGAGAGACGGTGGTTGGTGGGTCTGGCCATCGCAGGGTTGATCGGCGCGGCGCTGTTCATCAGCAGCGCGATCCGAACCTCGGACACGTCGTACCTGTGTCCGGGTTCGGTCGGGATGGGAACCCGAAGGGATTTCGGTTACGAGGCGTCACCGATCCAGCTTCGGGCGATACTCCACTACGCGACGTCGCGCGTGGTTCCGCAACAATCGGTGGCAGAGATCAAGGTCAGCTTGGACGTGCTAAAGTCACTGGGCCGGCCCTGCAACTTTCTGGTGTTCGGACTGGGCCACGACTCGCTCATGTGGGCCTCGTTCAACCCGGGCGGCACCACCTTGTTCCTGGAGGAGGACCCGAAATGGGTCCACAGCATCCTCAAGGACGCGCCGGGCCTGCGGGCCCACACGGTCCGGTACCGCACGCAGCTACGCGAGGCGAAGGCGCTGCTCTCGTGGTACCGCTCCGAACCCGCGTGCGGGCCCGCGAGGGCGTTCCTGCGAGGCAACGAAGCGTGCAAGCTGGCGCTGCAGAACTTGCCGGACGAGGTTTACGAGACGGAGTGGGACTTGATCATGATCGACGCGCCGAAGGGGTATTTCGCGGAGGCGCCGGGACGGATGGCGGCGGTGTTCTCGGCGGCGGTGATGGCGCGGAACAGGAAGGGATCGGGTGCGACGCACGTGTTCCTGCACGACGTGGATCGGAAGGTGGAGAAGGTGTACGCGGAGGAGTTTCTTTGTAGGAAGAACTTGGTGAAGGGTGTGGGAAGGCTTTGGCACTTCCAGATACCTCCTTCTAACCACACTAATGCAAATGCTTCTCGTTTCTGCTAG 855 0.6199 MKNRYPVAERRWLVGLAIAGLIGAALFISSAIRTSDTSYLCPGSVGMGTRRDFGYEASPIQLRAILHYATSRVVPQQSVAEIKVSLDVLKSLGRPCNFLVFGLGHDSLMWASFNPGGTTLFLEEDPKWVHSILKDAPGLRAHTVRYRTQLREAKALLSWYRSEPACGPARAFLRGNEACKLALQNLPDEVYETEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGATHVFLHDVDRKVEKVYAEEFLCRKNLVKGVGRLWHFQIPPSNHTNANASRFC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1821 284 PANTHER OS11G0490100 PROTEIN 1 284 IPR006514 GO:0045492
Ssu9g1821 284 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 284 - -
Ssu9g1821 284 Gene3D Vaccinia Virus protein VP39 70 283 IPR029063 -
Ssu9g1821 284 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 63 284 IPR006514 GO:0045492
Ssu9g1821 284 Pfam Polysaccharide biosynthesis 80 268 IPR021148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1821 Ssu-Chr9 55571599 55572453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1821 - - gmx:100791951 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1821 9 55571599 55572453 Ssu5g2331 5 65922616 65923473 PCT