Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1816 ATGGCCAAGACTGAGATAGATGTAAAGGTTGAGAGCAAGAACAAAGAACTAAAGCACCTGGGGTTTGTGAGAATTGCTGCTATTCGAACTTTTGTGTTTGTGTCTAATCTGTATGAATACGCAAAGCAGAACTCGGGGCCTTTGAGATCCGCTGTTGGAACGGTGGAGAGCACTGTAACCACTGTTCTTGGTCCTGTCTACAACAAATTCAAGGGCGTCCCTGATGATATCCTGGTTTTTGTTGACAATAAGGTGGAAGAAGCTACTCACAAGTTCGATGAGCATGCTCCTCCTTTTGCTAAGCACCTTGCCGATGGAGCCAAGTGTTTGATTCAGAAAGTGACACATGAGGCAGGGAAAGTAGCAAGTGAAGCTCAATCTGGGGGGCCACGAGCAGCTGTACATTATGTTGCTACAGAGTCAAAGCATTTTCTGTTGATAAGTTCAGTAAAGTTGTGGGCTGGGCTCAACCACTATCCACCAGTTCATGCATGGGCAGAGATGGCAGTTCCCACAGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGTCATGACTGAAAAGGGTTATAGTTTCGTTGGGTATCTACCTTTGATTCCCATTGATGAGATAGCCAAGGCATTTAAACAGGGAGAGGCGAACGTCAAAGAAGATGAAGCAGCCTCTGCGGAACAGAGATCAGAATCATCTGATTCTGATTAA 708 0.4562 MAKTEIDVKVESKNKELKHLGFVRIAAIRTFVFVSNLYEYAKQNSGPLRSAVGTVESTVTTVLGPVYNKFKGVPDDILVFVDNKVEEATHKFDEHAPPFAKHLADGAKCLIQKVTHEAGKVASEAQSGGPRAAVHYVATESKHFLLISSVKLWAGLNHYPPVHAWAEMAVPTAAHWSEKYNHVIKVMTEKGYSFVGYLPLIPIDEIAKAFKQGEANVKEDEAASAEQRSESSDSD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1816 235 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 235 - -
Ssu9g1816 235 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Ssu9g1816 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 235 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1816 Ssu-Chr9 55500368 55501845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1816 - - gmx:100816931 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1816 9 55500368 55501845 Ssu5g2323 5 65785281 65786733 PCT