Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1798 ATGTACGAGCACATCCGGTTGCGATACCATCTGTCCAAGATAAGCCATAGGTTCAGAATTTACCTGCTTCTACAGTTCCTGGTTGTCACAGCTAGCCAATTTGTGACTCTATTACAGGTCACTGGGTATGGTGGAGCAGTGACTTTCATAAATGGTAGAGATTTTGCTGTTTCTACATTTGTTCAGGTAGTTGGGATTATAATTTGTCTGCATGCAGCAACGAAGATTTCTCATAGAGCTCAAGGCATTGTTTCACTTGCAAGCCGTTGGCATGCGCTGGTAACATGCACTTCTGATGCATCTCAACTGAGAGATTGTGCTAGTACAGGGAGCTTGGAGGCTGCAAACCATTTAAACTCACTATTTTTGGACTACTCAGAAAGTGATCTAGAGTCATCGGTTTACCACCTCGGGATGCCTTCAAATGCTCGGTTGGCTTCGTGTATGTCCTCACATCACAAGAGACAAGCCTTTGTGATGTATCTGCAGACGAATGCTGGATGA 504 0.4444 MYEHIRLRYHLSKISHRFRIYLLLQFLVVTASQFVTLLQVTGYGGAVTFINGRDFAVSTFVQVVGIIICLHAATKISHRAQGIVSLASRWHALVTCTSDASQLRDCASTGSLEAANHLNSLFLDYSESDLESSVYHLGMPSNARLASCMSSHHKRQAFVMYLQTNAG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1798 167 Pfam Protein of unknown function (DUF3537) 1 167 IPR021924 -
Ssu9g1798 167 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 1 167 - -
Ssu9g1798 167 Coils Coil 166 167 - -
Ssu9g1798 167 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 1 167 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1798 Ssu-Chr9 55284534 55286721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1798 - - gmx:100796689 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1798 9 55284534 55286721 Ssu5g2302 5 65367964 65370953 PCT