Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2302 ATGGCCAATCTGCAAATTCAAACAGAGGAGCCCCCTGAGAGTCAAACCCCGCTCCTAACTTCAAACGAAGGAGTGGAGAACGGTGATGATAATAATGAGAATAAGAAAGAAGACGGTGACGGAGAGAATGAGGAGGACGAGAGTGAAGTGGAGGAGAGCCTGGCGCGGTTGGAGCGGTTTCTGACGGCGTTAGGGTTCAACCAGAATTCGGCGTTGAGTTTGGTGGTTTCGTGGAGTGTGTTCGCGGCGGTGGGAGTGGTGTTGCCGCTGGTGGCGCTGTCGATGTGCGAGTGTCAGGAGTGCGAGAGGTACGAGATTCAGAGCTTCGAGATGGTGATCGTGGCGTTTCAGGCGAGTCTCGCCGCCGTCTCCTTGCTGTGCCTCTCACACAACCTCCGTAAGTACGGTCTCCGCAGGTTCCTCTTCGTTGACCGCTACTCCGGACAGATGCGTTGCTTCTACCGCGACTACGTCGCTCAGATTTCGGGATCTGTGCGCTTGCTTGTTCTGTGGGTGTTGCCGTGTTTCCTTCTGAAGACAGTACGAGAAATCATTCGCATTTCTTATGTACAACATGGGTCATGGTGGCTCTCACTTGCTATTTTTTCGGCTTTGATTTTATCTTGGACTTATATGAGTACAATCTCTCTGTCGGCCTGCATTTTGTTTCACTTGGTCTGTAATTTGCAAGTGATCCACTTTGATGATTATGGGAAGCTCTTGCAAAGGGAAAGTGATGTGTTAGTTTTTATGGAGGAGCACATTCGTTTGCGCTATCATCTCTCCAAGATAAGTCATAGGTTCAGAATCTATCTTCTTCTAGAGTTCTTGGTTGTCACGGCTAGCCAGGCTGTGACTCTGTTGCAGGTCACTGGATATGGTGAAATGCTTACCTTCATTAATGGTGGAGATTTTGCTGTATCCACACTTGTTCAGGTGGTGGGCATCATTATTTGTCTGCATGCCGCAACAAGAATTTCTCATAGAGCTCAAGGCATTGTTTCACTTGCAAGCAGGTGGCATGCAATGGTAACATGCACATCTTCTGATGCATCTCAATTGAGAAGCTCTGCTAGTGCAGGGAGCTTGGAGGCTGCAAACCATTTAAACTCAATACATATAGACTATTCTGAAAGTGATGTAGAGTCGATGGATTATGCTGGAATGTCTACGAATACCCAACGGGCTTCCTATATGTCCTCACATCATAAGAGACAAGCTTTTGTGATGTATTTGCAGACGAATCCAGGAGGGATCACTATATTTGGATGGACAGTTGACCGGTCTCTAGTCAACACAATATTTTTCCTTGAATTAAGTCTGGTTACCTTTGTTCTCGGTCAGACACTAATCTAA 1356 0.4705 MANLQIQTEEPPESQTPLLTSNEGVENGDDNNENKKEDGDGENEEDESEVEESLARLERFLTALGFNQNSALSLVVSWSVFAAVGVVLPLVALSMCECQECERYEIQSFEMVIVAFQASLAAVSLLCLSHNLRKYGLRRFLFVDRYSGQMRCFYRDYVAQISGSVRLLVLWVLPCFLLKTVREIIRISYVQHGSWWLSLAIFSALILSWTYMSTISLSACILFHLVCNLQVIHFDDYGKLLQRESDVLVFMEEHIRLRYHLSKISHRFRIYLLLEFLVVTASQAVTLLQVTGYGEMLTFINGGDFAVSTLVQVVGIIICLHAATRISHRAQGIVSLASRWHAMVTCTSSDASQLRSSASAGSLEAANHLNSIHIDYSESDVESMDYAGMSTNTQRASYMSSHHKRQAFVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLGQTLI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2302 451 MobiDBLite consensus disorder prediction 1 27 - -
Ssu5g2302 451 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 6 451 - -
Ssu5g2302 451 MobiDBLite consensus disorder prediction 1 49 - -
Ssu5g2302 451 Pfam Protein of unknown function (DUF3537) 53 437 IPR021924 -
Ssu5g2302 451 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 6 451 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2302 Ssu-Chr5 65367964 65370953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2302 - - gmx:100793058 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1798 9 55284534 55286721 Ssu5g2302 5 65367964 65370953 PCT