Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1795 ATGAATGAGGTGGCGGCTACGACGTCGTCTTCAATGATGCGCAATTACCCTCTCATTTCCGCCATCGTTGCTTTCGCCATCGCACAATCCATCAAGTTTTTCACCGCCTGGTATAAGGAAAGAAGATGGGATCCGAAGCAACTTGTTGGATCTGGTGGAATGCCTTCATCCCATTCAGCTACTGTCACTGCTCTTGCCGCGGCAATTGGGTTCCATGAAGGCTTTGGAGGACCTCTTTTTGCTACTGCTTTGGTTCTAGCTTGTGTTGTGATGTATGATGCTACTGGTGTAAGATTGCAAGCAGGACGCCAAGCAGAGCTTTTGAACCAAATTGTATACGAACTTCCTGCTGAACATCCTCTGGCTGAAAGCAGACCACTCCGGGAACTTCTTGGGCATACCCCCCCTCAGGTCATTGCCGGTGGGTTACTTGGACTTATAACAGCAGCTATTGGCTATCTAATAACCATGACTAGTAGTTGA 483 0.4824 MNEVAATTSSSMMRNYPLISAIVAFAIAQSIKFFTAWYKERRWDPKQLVGSGGMPSSHSATVTALAAAIGFHEGFGGPLFATALVLACVVMYDATGVRLQAGRQAELLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGLITAAIGYLITMTSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1795 160 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 6 158 IPR003832 -
Ssu9g1795 160 Pfam Divergent PAP2 family 14 147 IPR003832 -
Ssu9g1795 160 PANTHER - 6 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1795 Ssu-Chr9 55253290 55255845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1795 K09775 - gmx:100815344 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1795 9 55253290 55255845 Ssu5g2299 5 65293605 65295875 PCT