Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g2299 | ATGGATGAGGCTGCAGCCATGCATTCTTCAACCTCACCAATCTCTTCCAATTACCCTCTCATTTCTGCCTTTGTTGCTTTTGCCCTTGCCCAATCCATCAAGTTCTTCACCACCTGGTTTAAGGAAAGAAGATGGGATCTGAAGCAATTAGTTGGGTCTGGTGGAATGCCATCATCTCATTCAGCAACTGTGACTGCTCTTGCAGCTGCCATTGGGTTGCAAGAAGGCGTTGGAGGACCTCTTTTTGCCACTGTCTTGGTTTTCGCTTGTATTGTGATGTATGATGCGACTGGTGTAAGATTGCAAGCAGGACGCCAAGCAGAGGTTTTAAACCAAATTGTGTATGAACTTCCTGCTGAACATCCTCTGGCTGAAAGCAAACCACTTCGTGAACTTCTTGGGCATACACCCCTTCAGGTCATTGTAGGTGGGTTACTTGGACTCTTAACAGCAATTGGCCTTCTAAGACCCTTGACTAAGAATTGTGGCCTTTCTTGA | 498 | 0.4618 | MDEAAAMHSSTSPISSNYPLISAFVAFALAQSIKFFTTWFKERRWDLKQLVGSGGMPSSHSATVTALAAAIGLQEGVGGPLFATVLVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESKPLRELLGHTPLQVIVGGLLGLLTAIGLLRPLTKNCGLS | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g2299 | 165 | CDD | PAP2_like | 20 | 155 | - | - | |
| Ssu5g2299 | 165 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 5 | 152 | IPR003832 | - | |
| Ssu5g2299 | 165 | PANTHER | PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED | 5 | 152 | - | - | |
| Ssu5g2299 | 165 | Pfam | Divergent PAP2 family | 16 | 149 | IPR003832 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu5g2299 | Ssu-Chr5 | 65293605 | 65295875 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu5g2299 | K09775 | - | cit:102619129 | 233.802 |
Event-related genes