Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1788 ATGAGCCACTCTGAGGAAAACAGTGATGTTGCTGCCAAGCAGAAGGCAATCGACGATTGGCTTCCAATCACTGCTTCCCGAAATGCCAAATGGTGGTATTCAGCTTTCCACAATCTCACAGCCATGGTTGGTGCAGGTGTCCTCAGCCTTCCTTTTGCAATGTCACATATGGGCTGggGTCCCGGCGTTACTGTGCTTATCCTGTCATGGGTTATCACCCTCTACACCCTGTGGCAAATGGTTGAGATGCACGAAATGGTGCCTGGGAAGAGATTCGATAGATACCATGAGTTGGGCCAGCATGCCTTTGGAGACAAACTGGGTCTATGGATTGTGGTTCCCCAGCAGGTTGTTGTGGAAGTTGGCACGTGCATTGTCTATATGGTCACTGGGGGCAAGTCATTGAAGAAAGTTCATGATACCCTTTGTGCCGATTGCAAAGATATTAAGACTTCATATTGGATCATTATCTTCGCTTCTGTGAACTTCGTTCTTGCGCAATGCCCCAACTTCAACTCCATCTCTGCTATCTCTTTTAGTGCAGCTGCCATGTCTTTGACGTAA 564 0.4752 MSHSEENSDVAAKQKAIDDWLPITASRNAKWWYSAFHNLTAMVGAGVLSLPFAMSHMGWGPGVTVLILSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGDKLGLWIVVPQQVVVEVGTCIVYMVTGGKSLKKVHDTLCADCKDIKTSYWIIIFASVNFVLAQCPNFNSISAISFSAAAMSLT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1788 187 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 186 - -
Ssu9g1788 187 Pfam Transmembrane amino acid transporter protein 28 186 IPR013057 -
Ssu9g1788 187 PANTHER OS05G0424000 PROTEIN-RELATED 8 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1788 Ssu-Chr9 55212586 55213339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1788 2 187 Organic Solute Cotransporters AT1G67640 76.882 2.75e-110 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1788 - - gmx:100786115 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1788 9 55212586 55213339 Ssu5g2291 5 65234939 65235971 PCT