Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2291 ATGTCCAACGATAATACGAATAGAAAGGCCATTAATGATTGGCTTCCTGTCACAGCCTCCCGAAATGCCAAATGGTGGTACTCTGCTTTCCACAACCTCACGGCTATGGTTGGTGCCGGTGTCCTCACCCTTCCTTATGCCATGTCTATGATGGGCTGGGGTCCGGGGGCAGTTGTGCTGATCTTGTCATGGATAATCACCTTGTTTACACTATGGCAAATGGTTGAGATGCACGAAATGGTGCCTGGCGTGAGATTCGACAGGTATCACGAGTTGGGGCAGCATGCCTTTGGTGAGAAGTTGGGTCTCTGGATCGTGGTTCCTCAACAGCTACTTGTTGAGGTTGGCACGTGCATTGTCTACATGGTCACGGGAGGCACATCACTAAAGAAGTTTCATGACACTGTTTGCCCCACGTGTCAAGACATTAGGACCTCGTATTGGATTATTATCTTCGCTTCTGTAAACTTCGTCCTCTGTCTATGCCCCAACTTCAACTCTATTTCTGTTGTCTCTTTGGCTGCAGCTGTCATGTCTATCGCGTAA 546 0.4853 MSNDNTNRKAINDWLPVTASRNAKWWYSAFHNLTAMVGAGVLTLPYAMSMMGWGPGAVVLILSWIITLFTLWQMVEMHEMVPGVRFDRYHELGQHAFGEKLGLWIVVPQQLLVEVGTCIVYMVTGGTSLKKFHDTVCPTCQDIRTSYWIIIFASVNFVLCLCPNFNSISVVSLAAAVMSIA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2291 181 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 5 180 - -
Ssu5g2291 181 PANTHER OS05G0424000 PROTEIN-RELATED 5 180 - -
Ssu5g2291 181 Pfam Transmembrane amino acid transporter protein 22 180 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2291 Ssu-Chr5 65234939 65235971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2291 2 181 Organic Solute Cotransporters AT1G67640 74.444 1.22e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2291 - - adu:107481978 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1788 9 55212586 55213339 Ssu5g2291 5 65234939 65235971 PCT