Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1684 ATGGGAGTTGGAGATTACTTGTCTGATTTAATGGGCAGTGGCAACCACCAACACAAAATCAATAAGAAGAAGCAATTACAGACCGTAGAGCTGAGGGTGATGATGGATTGTGACGGCTGTGAGCTCAAGGTTAAGAAAGCTCTCTCTTCATTAAATGGAGTAAAATCGGTGGAGATAAACAGGAAACAGCAGAAAGTGACAGTAACTGGTTATGTGGAACCAAACAAGGTCCTAAAGAAGGCCAAGTCAACAGGGAAGAAGGCTGAGATTTGGCCTTATGTACCTTACAACATGGTGGCTCATGCTCATCCTTATGCTATTCATGCTTATGACAAGAGGGCTCCTCCGGGATATGTGAGGAGAGTGGACAACTCTGCGACCATTGGAACCGTGACAACATATGAAGAGCCATACACCACCATGTTCAGTGATGAAAACCCAAATGCCTGTTCTATCATGTAG 462 0.4437 MGVGDYLSDLMGSGNHQHKINKKKQLQTVELRVMMDCDGCELKVKKALSSLNGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNMVAHAHPYAIHAYDKRAPPGYVRRVDNSATIGTVTTYEEPYTTMFSDENPNACSIM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1684 153 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 153 - -
Ssu9g1684 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 153 IPR045181 GO:0046872
Ssu9g1684 153 SUPERFAMILY HMA, heavy metal-associated domain 27 92 IPR036163 GO:0046872
Ssu9g1684 153 CDD HMA 30 89 IPR006121 GO:0046872
Ssu9g1684 153 Gene3D - 14 92 - -
Ssu9g1684 153 Pfam Heavy-metal-associated domain 31 87 IPR006121 GO:0046872
Ssu9g1684 153 ProSiteProfiles Heavy-metal-associated domain profile. 35 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1684 Ssu-Chr9 53816259 53817022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1684 - - gmx:100778653 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2751 5 73212966 73213508 Ssu9g1684 9 53816259 53817022 PCT