Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2751 ATGGGAGTTGGAGGCACACTGGAGTACTTGTCTGATCTAATGGGCAGCGGCTACCACCacaagaagaagaggaagcaGTTCCAGACCGTAGAGTTAAAGGTGAGGATGGATTGTGATGGTTGTGAGCTTAAGGTTAAGAATGCCCTCTCTTCACTAAGTGGAGTGAAATCAGTGGAGATAAACCGAAAACAGCAGAAAGTGACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTGAAGAAGGCCAAATCAACAGGGAAGAAGGCTGAGATTTGGCCTTATGTACCTTACAACTTGGTGGCTCATCCATATGCGGTTCCAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGGTCCCTGCTAACACTGGAACAGTTACAAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCAAATGCCTGCTCTATCATGTAG 459 0.4466 MGVGGTLEYLSDLMGSGYHHKKKRKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVAHPYAVPAYDKKAPPGYVRRVEVPANTGTVTRYEDPYITMFSDDNPNACSIM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2751 152 PANTHER - 3 152 - -
Ssu5g2751 152 ProSiteProfiles Heavy-metal-associated domain profile. 36 91 IPR006121 GO:0046872
Ssu5g2751 152 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 152 IPR045181 GO:0046872
Ssu5g2751 152 Gene3D - 24 91 - -
Ssu5g2751 152 Pfam Heavy-metal-associated domain 33 88 IPR006121 GO:0046872
Ssu5g2751 152 SUPERFAMILY HMA, heavy metal-associated domain 27 93 IPR036163 GO:0046872
Ssu5g2751 152 CDD HMA 31 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2751 Ssu-Chr5 73212966 73213508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2751 - - gmx:100500473 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2751 5 73212966 73213508 Ssu9g1684 9 53816259 53817022 PCT