Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1666 ATGGCCGAAACCCGAGACGTCGCCGCCGATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTGAGACCCGAGACGGGGGCCCATTTGGGAATCGGGTCGGGTGGGATTCGGAGGGTGAATTTCCGAGCGGAGATTGACACGTCGCCCCCGTTCGGATCGGTAAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCTTGGATACCATTTTTTAACAACATTGAAGATTTTGACTTAAAGAAAGTGGAGGAACAGGCAGCGGAGTTGGAGAAGGATTTGATTGTCAAAGAACTTGAAACACTTGACGTGCTTGAAGAACTGGGAGCTACCAAAAGGATTGTGGAGGACTTAAAGCAGCAGTTACAAAAAGAGGCTATGAAATGTTTAGCTACTCGCGATGTAAATTCATACGAACAAGTTGGAACTCCTGTTATTAAGGAGATGGATAAGGAAAATTGTGGAAATAATGTCAATGATCAAGAACAGATGATGCAAATTCCTAGCCCATGCTCTATGTCATCATCACCTGATATGATCTTAATGGAGTTGAAACAAGCCAAGTTGAATCTAGGCAAAACTATAAATGAACTTGGGGTGATACAATCCTCTGTTGAATCTTTGaataagaagatgaagaaggagaaaattttTCTGGGGAGGACACGTCAAATGCTAGCATCAAAGTTTGCAGCAGTGTCTGCTCAAGAGAGGGCCCAAGAGCAAACGAGGTTAAATCCGCCAGCATCTCATGTAGAATGCACCTTTGGTAACCCTGCACATATTATGAGGAATTTCAATGCTGATTCTGGGCAGTGCAATAGAATGGCTGAAACAAGAAGACCTGAACCTTCAAAGCCCTTAAGTGTGTATGAAGAATATGGATTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCAGCTAAAAAGATGGAAGAAGCTGCTAGGGCGGCAGAAGCTATCGCTCTTGCTGAAATCAAGGCTCTATCTAATGCTGAGAGATCTTCAGGATTTGTGCTGCCAGAACCTGAGAAAGTCACTTTTGCTTTTGGAGAGCGCTCTCCCCTAAACCCCAAGGCTCAGATACCGGAGGAGTCAACCTTGAAGAAGGTAATAGATTCCAAGTTTCAAATTGATGAAACAAAGATTTCTAAACATACTATTTTGAAGAAGTTGGAGGAAGCAACTGAAGAAGTTCTACACAGCAAACATGTCTTGACAGATGCTTTAAACAGAGTTGAAACTGCAAACAAAAAGCAGCATGCTGCTGAGGAGGCTCTAAGGAGATGGATTCCAGAGGATGATATGAAGGAGTATAACTCTGTCAATTGCAACAAGTTTAATCAAGCTGGAATTTGTCAAGATTCTCTGCAGGATGTAACCAGGTCAACAACAGCAAACAATGGTCCGAAGCCTGTTTTAAGGCCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCGTTGAGTCAAATGCTGCAAGCATTGAGGGAAGATCTGACTCTTCCATCAAAGACTCAGAAAGATGGAAGCAATCAGAAGCAGTTCATAGCACAGAGGAAGAAATTTGGATTCATTCAAATATCACTCCCCTTGACAAagccaaataaaaaaagggCATGA 1683 0.429 MAETRDVAADGVPGTPAIREVRPETGAHLGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNNIEDFDLKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCLATRDVNSYEQVGTPVIKEMDKENCGNNVNDQEQMMQIPSPCSMSSSPDMILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKIFLGRTRQMLASKFAAVSAQERAQEQTRLNPPASHVECTFGNPAHIMRNFNADSGQCNRMAETRRPEPSKPLSVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNAERSSGFVLPEPEKVTFAFGERSPLNPKAQIPEESTLKKVIDSKFQIDETKISKHTILKKLEEATEEVLHSKHVLTDALNRVETANKKQHAAEEALRRWIPEDDMKEYNSVNCNKFNQAGICQDSLQDVTRSTTANNGPKPVLRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPSKTQKDGSNQKQFIAQRKKFGFIQISLPLTKPNKKRA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1666 560 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 559 - -
Ssu9g1666 560 Coils Coil 405 425 - -
Ssu9g1666 560 Coils Coil 72 99 - -
Ssu9g1666 560 Coils Coil 104 124 - -
Ssu9g1666 560 PANTHER WEB FAMILY PLANT PROTEIN 3 559 - -
Ssu9g1666 560 Pfam Weak chloroplast movement under blue light 43 126 IPR008545 -
Ssu9g1666 560 Pfam Weak chloroplast movement under blue light 177 433 IPR008545 -
Ssu9g1666 560 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1666 Ssu-Chr9 53552944 53555515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1666 - - gmx:100776514 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1666 9 53552944 53555515 Ssu6g3110 6 70658406 70660321 PCT