Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1649 ATGGCAAATGTTGTGGAAGTGAAAGTCGGTTTGCACTGTGACGATTGTATCAAGAAAATCCTCAAGGCCATCAAGAAAATTGAAGATATTGAAACGTATAACGTGGACACACAGCTCAACAAGGTCATCGTTACGGGCAACGTCACAACGGAACAAGTCATCAGAGTCCTTCAAAAGATTGGGAAGAATGCAACTGCCTGGGAAGATGCTCAAACCAATGAGTGA 225 0.4311 MANVVEVKVGLHCDDCIKKILKAIKKIEDIETYNVDTQLNKVIVTGNVTTEQVIRVLQKIGKNATAWEDAQTNE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1649 74 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Ssu9g1649 74 Gene3D - 2 68 - -
Ssu9g1649 74 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 73 - -
Ssu9g1649 74 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Ssu9g1649 74 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 73 IPR045181 GO:0046872
Ssu9g1649 74 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1649 Ssu-Chr9 53306507 53306905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1649 - - gmx:100812505 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1649 9 53306507 53306905 Ssu6g3093 6 70465039 70465512 PCT