Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3093 ATGGCTAACGTGGTGGAAGTGAAGGTTGGTTTACATTGTGACGAGTGTATCAAGAAAATCCTCAAGGCCATCAAGAAGATTGAAgATATTGAGACGTATAATGTGGACAAACAGTTAAATAAGGTCATCGTTACAGGCAATGTCACAACGGAAGAAGTGATTAGAGTTCTTCAAAAGAGTGGCAAGAATGCAACCCCTTGGGAAAATGCTCAACCCCAACCCAATTGCTGA 231 0.4113 MANVVEVKVGLHCDECIKKILKAIKKIEDIETYNVDKQLNKVIVTGNVTTEEVIRVLQKSGKNATPWENAQPQPNC 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3093 76 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 71 IPR045181 GO:0046872
Ssu6g3093 76 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Ssu6g3093 76 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Ssu6g3093 76 SUPERFAMILY HMA, heavy metal-associated domain 4 68 IPR036163 GO:0046872
Ssu6g3093 76 Gene3D - 2 66 - -
Ssu6g3093 76 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3093 Ssu-Chr6 70465039 70465512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3093 - - adu:107496942 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1649 9 53306507 53306905 Ssu6g3093 6 70465039 70465512 PCT