Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1633 ATGATGAAGCCACCTTCCTCTTCCTCCATCCCTTCTCTTCTCAGAGTCAGGCCTCGCCTCTCTTCTTACCTCTTCACCCTCTTGGCTTTCATTCTCTTTGCCGCCATCCTCTATGGCCACGACTTCGTGTTCGTCTTTGCCCCACACCTCCACCTCCACTCCAACGAAGATGTCGAAACACAAACACTCTTCTCCACACCCGGGGTGATCTCGCCAGAGGGAAACAAGACGGTGACGAAAACGAAAAGGGAGGAAGAAGGAGGCTGTGACGTGTTCAACGGAACGTGGGTACGCGACGAGTTGACTCGGCCACTGTACGAGGAATCGGAGTGTCCGTACATACAGCCACAGTTGACTTGTCAAAAACACGGTCGGCCCGATAAAGAGTATCAACGGTGGCGCTGGCACCCTCACGGTTGTGATCTTCCCACATTCAATGCTAGTTTGATGTTGGAAATGCTTCGTGGGAAGAGGATGATGTTTATTGGAGACTCCCTCAACCGCAGTCAATATGTCTCTTTGGTATGTCTTCTTCATCAACTCATTCCTGAACATGCCAAAtctatggaaacctttgattcTCTCACCGTCTTTACAGCCAAGGAATACAATGCCACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATAACGCTGTCATCCATAGGGTATCTGATAGGATTGTGAGAAAGGGCTCAATCAATACGCATGGTCGTCATTGGAAAGGCGCTGACATTATTGTATTTAACACTTATCTTTGGTGGATAACTGGCTCTAAGATGAAGATCTTGCTTGGATCTTTTAAAGATGAAGTAAAGGAGATTGTTGAGATGTCAACGGAGGATGCCTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAGGCTGAACATGGACTCCAACAAGACAAGAGTCTTCTTTACTAGCATGTCACCTTCTCATGCAAAAAGCATAGAGTGGGGAGGTAGACTAGGAGGGAACTGCTACAATGAAACAACTCCAATTGATGATCCTGCATATTGGGGTTCCGACTCTAAAAAAGGCATAATGCAAGTAATTGGAGAAGTGTTTAGAAAATCCAAAGTACCTATAACTTTTCTCAACATTACCCAACTCTCCAACTACCGTAAAGATGCACACACATCAATCTACAAGAAGCAATGGAGCCCATTGACTCCAGCGCAAGTAGCTAACCCTGTTAGCTATGCTGATTGTGTGCACTGGTGTTTGCCTGGACTTCCGGATACTTGGAATGAGCTTTTGTTTGTCAAGTTATTTTATCCTTGA 1302 0.4493 MMKPPSSSSIPSLLRVRPRLSSYLFTLLAFILFAAILYGHDFVFVFAPHLHLHSNEDVETQTLFSTPGVISPEGNKTVTKTKREEEGGCDVFNGTWVRDELTRPLYEESECPYIQPQLTCQKHGRPDKEYQRWRWHPHGCDLPTFNASLMLEMLRGKRMMFIGDSLNRSQYVSLVCLLHQLIPEHAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRVSDRIVRKGSINTHGRHWKGADIIVFNTYLWWITGSKMKILLGSFKDEVKEIVEMSTEDAYRMAMKSMLRWVRLNMDSNKTRVFFTSMSPSHAKSIEWGGRLGGNCYNETTPIDDPAYWGSDSKKGIMQVIGEVFRKSKVPITFLNITQLSNYRKDAHTSIYKKQWSPLTPAQVANPVSYADCVHWCLPGLPDTWNELLFVKLFYP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1633 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 433 IPR029962 GO:0016413
Ssu9g1633 433 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 11 433 - -
Ssu9g1633 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 142 427 IPR026057 GO:0016740
Ssu9g1633 433 Pfam PMR5 N terminal Domain 88 141 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1633 Ssu-Chr9 53017556 53022186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1633 - - gmx:100782397 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1633 9 53017556 53022186 Ssu6g3076 6 70228806 70232021 PCT