Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3076 ATGCAAATGAAGCCACCATTCTCACCCTCTTCTTCCCTTCTAAGAGGCAAAGGTCGCCTCTCTCCCTACCTCTTCACCCTCGTAGCTTTCATCCTCTTTGTCGCCATCCTCTATGGCGAGGACTTCATGTGCATCTTCGGCCAACAGCTCCAAAACTACTCTTACCCTGACAAACTCTCCTCCACAACAGagaGGGTGAAGCGACAGAAACTGCCATTTGCAGTAGGGAAGGTGGAGGAAGGGTGCGACGTGTTCAGCGGAAGGTGGGTTCGGGACAAGTTGAGTCGACCGTTGTACGAGGAATCAGATTGTCCGTACATTCAACCACAATTGACTTGTCAAGAACACGGGCGACCCGACAAGGATTACCAGCATTGGAGGTGGCAACCACACGGTTGTGATCTTCCCAAGTTCAATGCCAGCTTGGTGCTTGAGACACTTCGTGGGAAAAGGATGATGTTTGTTGGTGATTCTCTTAACCGTGGTCAATATGTCTCTTTTGTATGCCTTCTCCATCAACTCATTCCTGAAGATGCCAAATCAATGGAAACCTTTGATTCACTCACTGTATTTACAGCCAAGGAATACAATGCTACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCGGACAATGCTGTCCTACATAGGATATCTGATAGGATTGTCAGAAAAGGTTCAATCAATAAGCATGGCAGGAATTGGAAAGGTGTTGATATTTTGGTATTCAACACTTATCTTTGGTGGATGACAGGATTGAAGATGAAAATCTTgtatgtttttctattatattcaaACAACAATTGCTTAGCCATCTTTCATATCTTTTTTCTCTGGACTtcgaaaataatatttgatctGTTCCTCTAA 879 0.4266 MQMKPPFSPSSSLLRGKGRLSPYLFTLVAFILFVAILYGEDFMCIFGQQLQNYSYPDKLSSTTERVKRQKLPFAVGKVEEGCDVFSGRWVRDKLSRPLYEESDCPYIQPQLTCQEHGRPDKDYQHWRWQPHGCDLPKFNASLVLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVLHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLKMKILYVFLLYSNNNCLAIFHIFFLWTSKIIFDLFL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3076 292 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 ISOFORM X1 12 267 - -
Ssu6g3076 292 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 267 IPR029962 GO:0016413
Ssu6g3076 292 Pfam PMR5 N terminal Domain 81 134 IPR025846 -
Ssu6g3076 292 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 135 256 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3076 Ssu-Chr6 70228806 70232021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3076 - - gmx:100785571 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3076 6 70228806 70232021 Ssu6g3076 6 70228806 70232021 ECH
Ssu9g1633 9 53017556 53022186 Ssu6g3076 6 70228806 70232021 PCT