Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1626 ATGATAACCTTGCTtGTGGAGTACAATGTTTCGTACGTTTATCATGCGATGTTTGCCTACTTCGACAGGGACAATGTTGCGCTCAAGGGGCTTGCCGAGTTTTTCAAGGAGTCAAGCGAGGAGGAAAGGGAGCATGCTGAGAAGTTGATGGAATATCAGAACAAACGGGGTGGAAGAGTGAGGTTGCAATCTATAGTGACGCCACTTTCTGAGTTTGACCATGAGGAAAAGGGAGATGCGCTATATGCAATGGAACTTGCTCTGTCGTTGGAGAAGCTAACGAATGAAAAGCTGCTTAACTTGCACGGTGTTGCTTCAAAGAACAATGATGTGCAGTTGTCAGATTTTATTGAAAGCGAGTTTTTGGGTGAACAGgTGGAAGCCATTAAAAAATCTCTGAGTACGTTGCTCAGCTCAGAAGAGTTGGTAAAGGACATGATGCTGCTTCATGAGGAGGAAGTTGCTGCTTGA 471 0.4459 MITLLVEYNVSYVYHAMFAYFDRDNVALKGLAEFFKESSEEEREHAEKLMEYQNKRGGRVRLQSIVTPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHGVASKNNDVQLSDFIESEFLGEQVEAIKKSLSTLLSSEELVKDMMLLHEEEVAA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1626 156 CDD Euk_Ferritin 6 138 - -
Ssu9g1626 156 Pfam Ferritin-like domain 6 131 IPR008331 GO:0008199
Ssu9g1626 156 Gene3D - 3 155 IPR012347 -
Ssu9g1626 156 PANTHER FERRITIN 6 132 IPR001519 GO:0006826|GO:0006879|GO:0008199
Ssu9g1626 156 ProSitePatterns Ferritin iron-binding regions signature 1. 41 59 IPR014034 -
Ssu9g1626 156 SUPERFAMILY Ferritin-like 6 131 IPR009078 -
Ssu9g1626 156 ProSitePatterns Ferritin iron-binding regions signature 2. 110 130 IPR014034 -
Ssu9g1626 156 Coils Coil 35 56 - -
Ssu9g1626 156 PANTHER FERRITIN 6 132 - -
Ssu9g1626 156 ProSiteProfiles Ferritin-like diiron domain profile. 1 143 IPR009040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1626 Ssu-Chr9 52922676 52924542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1626 K00522 - gmx:547476 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1626 9 52922676 52924542 Ssu6g3073 6 70160687 70162962 PCT