Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1623 ATGGCAATTTGGGTTGAAAGCCTATTGAAAGAGAGAAAGTACCCGTTCATTTTCACTCTCGCGGTCCTGCTCATGTGCGTCACGATCCTCCTCTTCACCAACAACGCCACCTCCAACTCCAAGTTCGATCCAGCGGGCTTCTATCCCGATGTCAAACCGCAACCGCTCGCACAATTTCCTTCCCCGACTCCCAAAAAACACCAACGATTGCCCCTCAGGGGGGAGCCTCTCTTGGTCGATGATGCAAACATTGATTGGAAGCCTTGTAAGGGTCCGCTGGCGGCGGATTATATACCCTGTTTGGATAATTTCAGGGCCATTAAGGCTCTCAAGTCAAGGAGGCACATGGAGCACAGGGAAAGACACTGTCCTGATTCTAGTCCCCGTTGTTTGGTGCCCCTCCCAAGAGGGTACAAAGTCCCCCTTCCGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATCCAAAGCTTGTTGAATTCAAGAAGGAGCAAAACTGGGTGGTGAAGTCCGCCGATTATCTTGTCTTTCCTGGAGGTGGTACTCAGTTCAAAGAAGgagttaaccattatactaaATTCATAGAGAAGACACTACCAGCAATCCAATGGGGAAAGAATATCAGGGTTGTTCTTGATGTTGGTTGTGGAGTTGCCAGCTTTGGTGGCTACCTTCTGGACAAAAATGTTATTACTATGTCATTTGCACCAAAGGATGAACATGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACCCTTTCTGTCATTGGAACCCAGAAGTTGACATTTCCTAACAATGGATTTGATTTGATCCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGGTGGGAAACCATTATTCGAGCTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCGACACCAGTTTATCGTGATGATGAAAGAGATCGGAAAGTATGGAATGCCATGGTGACTGTAACAAAAGCAATGTGCTGGACTGTTGTGGCTAAGACTCTTGATTCATCTGGAATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCCTGTTATCAGGAACGCAAAGAGAGCACTCCTCCTTTATGTGAAAATAACTACAGGAAAAATATCACATGGTATGCCAAACTCAGTAGCTGCCTTATACCTCTTCCAGTTGATGGTGAGGGTAACCTGCAGAGCTGGCCAATGCCTTGGCCCCAGAGGCTTAACAGTATACCACCAAGCTTGTCGACTGAACCAGATGCCGGCGAGACGTTCTTCAAGGACAGCAAACACTGGTCCGAATTAGTTTCAGACATTTATAGGGATGGTCTCTCTATAAACTGGTCAAGTGTTAGAAATATAATGGACATGAATGCCGGTTATGCAGGaTTTGCTACAGCACTCATTGATCTACCAGTCTGGGTGATGAATGTGGTACCCATTGATATGCCAGAGACTCTTACTTCTATATTTGACAGAGGGCTAATAGGAATATATCATGATTGGTGCGAGTCCTTTAATACCTACCCTCGCACTTATGATCTTGTTCATGCTAACTTTCTCTTCAAACATCTAGAGCAAAGATGTGACATTGTAGATGTGGTTGTGGAGATAGATCGCATATTGAGACCAGATGGGTATCTCCTGGTTCAGGACTCTATGGAAATAATTAACAAGCTCGGTCCGGTCCTGCGTTCACTTCATTGGTCTGTAACATTGTATCAAAATCAGTTTCTTGTTGGTAGGAAGAGTTTCTGGCGTCCAAAGCGGTAG 1794 0.4509 MAIWVESLLKERKYPFIFTLAVLLMCVTILLFTNNATSNSKFDPAGFYPDVKPQPLAQFPSPTPKKHQRLPLRGEPLLVDDANIDWKPCKGPLAADYIPCLDNFRAIKALKSRRHMEHRERHCPDSSPRCLVPLPRGYKVPLPWPKSRDMIWYDNVPHPKLVEFKKEQNWVVKSADYLVFPGGGTQFKEGVNHYTKFIEKTLPAIQWGKNIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPNNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSSSCYQERKESTPPLCENNYRKNITWYAKLSSCLIPLPVDGEGNLQSWPMPWPQRLNSIPPSLSTEPDAGETFFKDSKHWSELVSDIYRDGLSINWSSVRNIMDMNAGYAGFATALIDLPVWVMNVVPIDMPETLTSIFDRGLIGIYHDWCESFNTYPRTYDLVHANFLFKHLEQRCDIVDVVVEIDRILRPDGYLLVQDSMEIINKLGPVLRSLHWSVTLYQNQFLVGRKSFWRPKR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1623 597 Gene3D Vaccinia Virus protein VP39 186 388 IPR029063 -
Ssu9g1623 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 329 IPR029063 -
Ssu9g1623 597 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 596 IPR004159 GO:0008168
Ssu9g1623 597 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 96 584 IPR004159 GO:0008168
Ssu9g1623 597 Gene3D Vaccinia Virus protein VP39 430 582 IPR029063 -
Ssu9g1623 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 408 573 IPR029063 -
Ssu9g1623 597 PANTHER PMT16, PUTATIVE-RELATED 4 596 - -
Ssu9g1623 597 CDD AdoMet_MTases 214 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1623 Ssu-Chr9 52896467 52900660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1623 - - gmx:100808221 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1623 9 52896467 52900660 Ssu6g3069 6 70128525 70132522 PCT