Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3069 atggCAATTTTAGCTGAAGACTTCTTTAAGGAGAGGAAGTACCCTTTCATTTTCACTCTCTTAATCTTGCTCATTTGCGTTACGCTCTTCCTCTTCACCAACACCACCTCGAACCCTGTTGCATTCTATTCTGTTATCAAAGAGCAACCACCCCTCAACCCTTCGCATGCACCTGTTGATTCTACCGCAAATCCAAAGGAGCAAGAGCTACCTCCAAAAGTGACCAATGTCTCAGCCGAGAAGGACCAAGTTTTGCCCCCAAAGGAGGAGCCTATGTCCGTTGATGTGAGGATCGATTGGAAGCTATGTGAGGACCCGGTTAATGTTGATTTTATACCCTGTTTGGATAACCTTAAGGCGATCAAGGCTCTGAGGTCGAGGAGGCACATGGAGCACAGGGAAAGGCATTGTCCTGAGACTAGTCTGCACTGTTTGCTGCCCCTTCCGAAAGGGTATAAAGTCCCGGTTCCGTGGCCCAAGAGCAGGGACAAGATTTGGTATGATAACGTCCCTTACCCGAAGCTGGTCGAGTACAAGAAAGACCAACACTGGGTAGTGAAGTCTGGGGAATATCTGGTCTTTCCAGGTGGTGGTACTCAATTCAAAGATGGAGTTGATCATTATATTCAGTTCATAGAGAAGACTTTACCAGCAATTCAATGGGGAAAGCATACCAGGGTCGTTCTAGATGTTGGCTGTGGTGTTGCTAGCTTTGGTGGCTATCTGCTGGACAAAAATGTTATTACTATGTCTTTTGCCCCAAAGGATGAACATGAAGCTCAGATACAGTTTGCTCTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAACACAAAAGTTGACTTTTCCTGACAATGGGTTTGATTTGATCCATTGTGCACGATGTAGGGTTCACTGGGATGCAGATgGTGGGAAGCCCTTATTTGAGCTCAATAGGGTTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTACCGCGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGGTTATAACAAAAGCTATGTGCTGGAAGGTTGTGGCTAAGGTTCGTGATTCATCTGGAATTGGGCTTGTTATATACCAGAAGCCAACCTCTTCTTCTTGCTATGAGAAACGTGAAGAGAACAATCCACCTTTATGTGAAAATAAGGATGGGAAGAATAGATCATgGTATGCCAGACTCAATAGTTGTCTTACTCCTCTTCCGGTTGATGGTATGGGTAACGTGCAGAGATGGCCCAAGCCTTGGCCCCAGAGGCTTACCAGTAAGCCCCCTAGCTTAGCAACTGAATCAGATGCCAATGACAAGTTCTTCAAGGACAGCAAACGCTGGTCTGAATTAGTTTCAAATGTTTATATGGATGGTCTTCCTATAAACTGGTTAAGTGTTCGAAATGTAATGGACATGAATGCTGGTCATGCAGGATTTGCCGCAGCTCTCATTGATCAACCAGTCTGGGTGATGAATGTAGTACCGATTGATGTGCCAGATACTCTCTCTGTTATATTGGACAGAGGGTTAATGGGAATGTATCATGATTGGTGCGAGTCCTTTAATACCTATCCTCGCACATATGATCTCCTCCATTCTagctttcttttcaaatatcttGAGCAAAGATGTGACATTGTAGATGTGGCTGTGGAGATTGATCGCATATTGAGACCAAATGGATATCTCATTGTTCACGATTCTATGGAAACACTTAACAAGCTCATTCCAATCTTGCGTTCACTTCACTGGACTGTAACATTGCATCAAAATCAGTTTCTTGTAGGTAGGAAGAGTTTCTGGCGTCCTACGAGCTCTTCAAACTGA 1845 0.4396 MAILAEDFFKERKYPFIFTLLILLICVTLFLFTNTTSNPVAFYSVIKEQPPLNPSHAPVDSTANPKEQELPPKVTNVSAEKDQVLPPKEEPMSVDVRIDWKLCEDPVNVDFIPCLDNLKAIKALRSRRHMEHRERHCPETSLHCLLPLPKGYKVPVPWPKSRDKIWYDNVPYPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKDGVDHYIQFIEKTLPAIQWGKHTRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRVLRPGGFFAWSATPVYRDDERDQKVWNAMVVITKAMCWKVVAKVRDSSGIGLVIYQKPTSSSCYEKREENNPPLCENKDGKNRSWYARLNSCLTPLPVDGMGNVQRWPKPWPQRLTSKPPSLATESDANDKFFKDSKRWSELVSNVYMDGLPINWLSVRNVMDMNAGHAGFAAALIDQPVWVMNVVPIDVPDTLSVILDRGLMGMYHDWCESFNTYPRTYDLLHSSFLFKYLEQRCDIVDVAVEIDRILRPNGYLIVHDSMETLNKLIPILRSLHWTVTLHQNQFLVGRKSFWRPTSSSN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3069 614 PANTHER PMT16, PUTATIVE-RELATED 4 612 - -
Ssu6g3069 614 MobiDBLite consensus disorder prediction 53 77 - -
Ssu6g3069 614 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 612 IPR004159 GO:0008168
Ssu6g3069 614 Gene3D Vaccinia Virus protein VP39 207 357 IPR029063 -
Ssu6g3069 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 457 584 IPR029063 -
Ssu6g3069 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 342 IPR029063 -
Ssu6g3069 614 CDD AdoMet_MTases 228 322 - -
Ssu6g3069 614 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 598 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3069 Ssu-Chr6 70128525 70132522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3069 - - gmx:100800390 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1623 9 52896467 52900660 Ssu6g3069 6 70128525 70132522 PCT