Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1618 ATGGATTTGAAAGaaaagaaaagaaaagaaaaaagcaaaaacctGGTGCGTTGCTTTTACTCACACACTATCCTCTCCAACCCACCAAGCAAACTGCCTCCGAATCCGATCAATGGAAAACTCAGACGAAGGAAACGAACAACTTCCCTTCCTCCAAACCCTAACAATGCCGAAGAAGACGACGACATCGACGaagacgacgacgacgacgacgacaaCGACGTCGTTTCGCAGGAGTCTCACGAGCAATCCCCATTGTCGCGGTTGCGCGAGCAGCGTGCGAAGTTGGAAACTCTGTCCCGGCGCTTGGCGTCGGAGCTGGTCCCTATCCGAGTCCACGACGTGCTGATTCGCGGCAACACGAAGACGAAGGACTGGGTGATCGAGGCGGAGCTCAAGCTCCTCGAGGACGCCGCCACCGTGCAGGAGCTCATTCGCGCCTCCGAAATCGCCGTCGCCAGGCTTCGGAGCCTCGAGATTTTTGACTCCACGGAGCTCACGCTCCAGGCCGGGCCGTCGGAGCTGCCGCACACCGCCAATGTCGTCGTCGACGTCGTCGAGACCGCTAACAAAATCTCCGGCGAATTCGGCGTTTACACCAAACCCTCGACTAGTTCTTGGACCGCTGAAGGTGCTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCCTCTTTGGCCTATGGTGCCAACCAAGCAACAGAGGTGAGTGTAGGAGTGTATGCCCCTCGACTGAAAGGGTTGTTAACCCCTCTTGTAGCACGACTATCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAGTTGTTAGGATTGTCTCTTGGCTTAATCTCAACAAGGCACCATGACTTCGTCTACACTCTTGGCTGGCGTACCTTGACGGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAGCTTGGGCATGGTTTGCTATCATCTTTGaagtatacatttaaaattgacTGGAGAAACTCACCAATTAGGCCTACAAATGGATATGCTTTTCTTTCTACCACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGATTTCTGCGCCAGGAATTTGATGTTCGCTGTGCCATCCCCTTTGGGTTTTATAATATGGCACTTAACCTTGGGATTTCTGCCGGTGCTGTTTTTCCATGGGGGCATGGTTTCATGAACAAGCCATCTCCGCTCCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCAATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCACGGAGGAGAAGCAGAGATGGAATTATTGATGTCAATGATGATTCCTCTAGATGGGACTTCATTGGAGGAGATCTTGCTGCTACTGCTTTTGCAGATTTGTCTTTTGATCTTCCAGTTAGGTGGTTGAGAGATCATGGAATCCATGGTCATGTTTTTGCTGGTGCTGGGAATACTGCCAAATTAACTCAGAATGAATATAAGCGTTTTTCAGCTTGGAAGTTCTTAGAATCCTTTCGAACATCAGTGGGATGTGGATTTGTTGTTCCTACTAGACTTTTTCGCCTAGAGGGTAATTTCTACTACATACTCAGGCAGAATGAACATGATCGTGGGAAAACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1692 0.4716 MDLKEKKRKEKSKNLVRCFYSHTILSNPPSKLPPNPINGKLRRRKRTTSLPPNPNNAEEDDDIDEDDDDDDDNDVVSQESHEQSPLSRLREQRAKLETLSRRLASELVPIRVHDVLIRGNTKTKDWVIEAELKLLEDAATVQELIRASEIAVARLRSLEIFDSTELTLQAGPSELPHTANVVVDVVETANKISGEFGVYTKPSTSSWTAEGALKYKNLLGYGDLWDASLAYGANQATEVSVGVYAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISTRHHDFVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDWRNSPIRPTNGYAFLSTTHFGGLTPDHRSLRFLRQEFDVRCAIPFGFYNMALNLGISAGAVFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRSRDGIIDVNDDSSRWDFIGGDLAATAFADLSFDLPVRWLRDHGIHGHVFAGAGNTAKLTQNEYKRFSAWKFLESFRTSVGCGFVVPTRLFRLEGNFYYILRQNEHDRGKTGFRFSFSAPS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1618 563 Gene3D membrane protein fhac 109 188 - -
Ssu9g1618 563 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 199 561 - -
Ssu9g1618 563 Pfam Omp85 superfamily domain 217 560 IPR000184 GO:0019867
Ssu9g1618 563 MobiDBLite consensus disorder prediction 57 76 - -
Ssu9g1618 563 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 27 561 IPR039910 -
Ssu9g1618 563 Coils Coil 86 106 - -
Ssu9g1618 563 MobiDBLite consensus disorder prediction 20 91 - -
Ssu9g1618 563 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 27 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1618 Ssu-Chr9 52830937 52835791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1618 K07277 - gmx:100785408 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1618 9 52830937 52835791 Ssu6g3063 6 70058338 70069150 PCT