Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1593 ATGGCCACCCACAACTACAAAATCTTCAGCTGCTTCAACCGGAAATTCATCATCACCGAACCGGGCCCATCGCCCGACGTCCAAAAGGCATTTTCCGACTTCGCCGCCGGCGCCTCCTCCATGTCCGCCGATCATCTCCTCCGCTTCCTGGCGGAGCATCAGGGCGAAGTGGACTGCACCCCATCGGATTCCAAGCGGATCATCCAGCAATCGCGGAAACAGGATCAGGAAAGTGGATTCGATCTCCACGACTTCTTCCATTTCCTGCTTGATGACGATTTCAATAGCCCCTTGAAATCTCAGGTACATCATGATATGAATGCTCCATTGTcacattatttcatatataccGGGCACAATTCCTATCTGACTGGGAATCAACTGAGCAGTGACTGCAGTGATGAGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAGCCAAAGATGATATCGATGTAGTTCATGGAAGGACTCTTACCACTCCTGTCTCACTCATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCACTATCCACTTATTATAACTTTAGAAGATCATCTTACTCCAGATCTTCAAGCTAAAGTTGCAGAGATGGCAACTCAAATATTTGGAGAATTGCTTTATTATCCTGAGACGGATTCTCTTACGGAATTCCCCACACCAGAATCATTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATTTCTTGAATCCAAACAATGTGATGACAAGGACAATGAAAAGGAATCAGATGACGAGGGTTCATCATTGCCAGACCATACTAATGAACCGGAAACTGATGATGAGAGTGCACCTGAGTACAAACGCTTGATTACAATCCGTGCTGGGAAACCAAAGGGTGACATACAAGATGAATTAAAAGCTGTTGGTGAAGTTAGGCGCTTAAGCTTGAGTGAACAAGCACTTGAAAAGGCTTCTGACTCTTATGGAGCTGACATTGTTAGGTTTACGCAGAAGAACATTCTCAGAGTGTATCCAAAGGGAACACGTCTCAACTCCTCAAATTACAAGCCACACATAGGGTGGACGTACGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGTATGGCAAATCACTTCGGTTCATGCAAGGAATGTTTAGAGCAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTTCTAATTCAAAAAGGTCCACATGATGAGGTTTTTGATCCTAAAAGAACATTGCCAGTGAAGAAAACATTAAAGGTAAAAGTCTATATGGGGAACGGTTGGAGCTTAGATTTCAGCCAAACAGACTTCGATACTTACTCACCACCAGACTTTTACGTTAAGGTTTGTATTATTGGAGTTCCTGCTGATATGGCCAAGAAGAAAACAAgtgtaatttcaaataattggtTTCCCGTCTGGGACGAAGAGTTTGATTTCCCTTTGACAGTTCCAGAGCTGGCTTTGCTCCGCATAGAAGTTCGAGAGAACGATAAGCATCAAAAGGATGACTTTGGTGGACAGACGTGTTTGCCAGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTGTATGATGAAAAGGGTGACAAATTAAAATCTGTGAAGCTTTTGATTAGGTTTCAGTTTAGATGA 1671 0.4249 MATHNYKIFSCFNRKFIITEPGPSPDVQKAFSDFAAGASSMSADHLLRFLAEHQGEVDCTPSDSKRIIQQSRKQDQESGFDLHDFFHFLLDDDFNSPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDEPIIKALQRGVRVIELDLWPNSAKDDIDVVHGRTLTTPVSLIQCLKSIKEYAFVKSHYPLIITLEDHLTPDLQAKVAEMATQIFGELLYYPETDSLTEFPTPESLKGRILISTKPPKEFLESKQCDDKDNEKESDDEGSSLPDHTNEPETDDESAPEYKRLITIRAGKPKGDIQDELKAVGEVRRLSLSEQALEKASDSYGADIVRFTQKNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGYGKSLRFMQGMFRANGGCGYVKKPEFLIQKGPHDEVFDPKRTLPVKKTLKVKVYMGNGWSLDFSQTDFDTYSPPDFYVKVCIIGVPADMAKKKTSVISNNWFPVWDEEFDFPLTVPELALLRIEVRENDKHQKDDFGGQTCLPVSELKSGFRSVPLYDEKGDKLKSVKLLIRFQFR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1593 556 ProSiteProfiles C2 domain profile. 409 538 IPR000008 -
Ssu9g1593 556 SMART plcy_3 292 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1593 556 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Ssu9g1593 556 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Ssu9g1593 556 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 555 IPR001192 GO:0035556
Ssu9g1593 556 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 555 - -
Ssu9g1593 556 CDD C2_PLC_like 426 556 - -
Ssu9g1593 556 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 321 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1593 556 SMART C2_3c 428 536 IPR000008 -
Ssu9g1593 556 MobiDBLite consensus disorder prediction 254 291 - -
Ssu9g1593 556 CDD PI-PLCc_plant 103 395 - -
Ssu9g1593 556 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Ssu9g1593 556 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Ssu9g1593 556 PRINTS Phospholipase C signature 367 385 IPR001192 GO:0035556
Ssu9g1593 556 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Ssu9g1593 556 PRINTS Phospholipase C signature 346 367 IPR001192 GO:0035556
Ssu9g1593 556 PRINTS Phospholipase C signature 522 532 IPR001192 GO:0035556
Ssu9g1593 556 Gene3D Phosphatidylinositol (PI) phosphodiesterase 100 421 IPR017946 GO:0006629|GO:0008081
Ssu9g1593 556 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 73 IPR015359 -
Ssu9g1593 556 SUPERFAMILY PLC-like phosphodiesterases 104 409 IPR017946 GO:0006629|GO:0008081
Ssu9g1593 556 Pfam C2 domain 429 530 IPR000008 -
Ssu9g1593 556 Gene3D - 22 99 - -
Ssu9g1593 556 Gene3D C2 domain 423 556 IPR035892 -
Ssu9g1593 556 SUPERFAMILY EF-hand 6 106 IPR011992 -
Ssu9g1593 556 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 320 406 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1593 556 SMART plcx_3 104 248 IPR000909 -
Ssu9g1593 556 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 428 555 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1593 Ssu-Chr9 52256017 52262679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1593 2 555 Acyl Lipid Metabolism Gene Families AT2G40116 62.667 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1593 K05857 - gmx:100799027 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1593 9 52256017 52262679 Ssu6g3036 6 69539227 69544609 PCT