Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3036 ATGGGCTCCGTCACCTACAGCTACAAAATGTTCAGGTGCTTCAACCGAAAGTTCGCCGTCTCCGAGCAGGCCCCTCCGCCGGACGTCAGGGAGGCCTTCTCCCTCTTCGCCGACGGCGCCCCTTCCATGTCCGCCGACCAGCTCCTCCGCTTCCTGCACGACCACCAGCGCGAACTCGGCTGCACCGCGCAGGATTCCAGCCGCATCGTCGACAGCGTCCTGCAATCGCGAAAACAAAACGACAGTGCCAAATGCGACCCCGATGGGCCCCACCTCGGACTCACCCTCGATGAGTTCTTCCGTTTCTTGTTCATCGTCGATTTCAACGCCCCCCTCAAATCCCAGGTCCATCATGATATGAATGCTCCGTTATcacattatttcatatatacagGGCACAATTCCTATCTGACTGGGAATCAGCTGAGCAGCGATTGTAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTGGATTTATGGCCAAATTCAACTAAAGATGATATCGACGTAGTTCATGGAAGGACACTTACTACTCCTGTCTCACTTATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGAATACCCAGTCATTATAACTTTAGAAGACCACCTTCCACCATATCTTCAAGCCAAAGTTGCAGAGATGACAACTCAAATATTTGGAGATATGCTCTATTTTCCTCTGACAGATCCTCTTACAGAATTCCCCACACCAGAATCGTTGAAAGGTAGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGCGAGAGGGAATCGACTGAAGAAGGATCACCATCGCCATGCCTTTTCACGGAAGTGGAAGTTGTTGATGAGAAGTTCGATGGAAATGATCCTGATGAGGAAGGCTTGGATGCTAGGGATAAAAAATCAGACCAACAGAGTGCACCGGAATACAAACGTTTGATTACAATCCATGCTGGGAAGCCGAAGGGTCATGTAAAGGACCACTTAAACATTGTTGGGGGTGTAAAGCGCTTGAGCTTGAGCGAACAGGAACTTGCAAAGGCTTCTGCCTCATATGGTTCTGATATTGTTAGATTCACCCAGAAGAATATTATCAGGGTGTATCCTAAGGGAACACGTGTCACCTCCTCAAATTACAGGCCTCATATAGGGTGGATGTACGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTACATGCAAGGGATGTTTAGAGCAAATGGCGGGTGTGGTTATGTAAAAAAACCTGCATTTCTGATAGAAAATGGCCCACATAATGAGGTTTTTGATCCTAAAAGAACAATACCAGTGAAGAAGACATTAAAGGTAAAAGTATATATGGGAAACGGGTGGAGCTCAGATTTCAGCAAAACACACTTTGATACATTCTCTCCACCAGACTTTTACACAAAGgTATGCATTGTTGGAGTACCAGCTGATAAAGCCAATAAGAAGACCAAGGTAATTCAAGACAATTGGTTTCCCGTCTGGGACGAAGAGTTTGAATTTCCTTTGACTGTTCCAGAACTAGCTTTGCTCCAGATAGAAGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGCGGGCAAACATGTTTGCCAGTCTCTGAGCTAAGATCTGGTTTCCGGGCAGTCCCTCTATATGATCAGAAGGGCGAGAAATTAAAATCTGTAAAGCTTTTGATGCGGTTTCAGTTCAAATGA 1779 0.4497 MGSVTYSYKMFRCFNRKFAVSEQAPPPDVREAFSLFADGAPSMSADQLLRFLHDHQRELGCTAQDSSRIVDSVLQSRKQNDSAKCDPDGPHLGLTLDEFFRFLFIVDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTTPVSLIQCLKSIKEYAFVKSEYPVIITLEDHLPPYLQAKVAEMTTQIFGDMLYFPLTDPLTEFPTPESLKGRILISTKPPKEYLESKQFKDSDSERESTEEGSPSPCLFTEVEVVDEKFDGNDPDEEGLDARDKKSDQQSAPEYKRLITIHAGKPKGHVKDHLNIVGGVKRLSLSEQELAKASASYGSDIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPAFLIENGPHNEVFDPKRTIPVKKTLKVKVYMGNGWSSDFSKTHFDTFSPPDFYTKVCIVGVPADKANKKTKVIQDNWFPVWDEEFEFPLTVPELALLQIEVREYDKHEKDDFGGQTCLPVSELRSGFRAVPLYDQKGEKLKSVKLLMRFQFK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3036 592 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 591 - -
Ssu6g3036 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 118 262 - -
Ssu6g3036 592 Gene3D C2 domain 459 592 IPR035892 -
Ssu6g3036 592 SMART plcx_3 118 262 IPR000909 -
Ssu6g3036 592 ProSiteProfiles C2 domain profile. 445 574 IPR000008 -
Ssu6g3036 592 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 591 IPR001192 GO:0035556
Ssu6g3036 592 SMART plcy_3 328 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3036 592 MobiDBLite consensus disorder prediction 268 284 - -
Ssu6g3036 592 SUPERFAMILY EF-hand 8 120 IPR011992 -
Ssu6g3036 592 Gene3D - 23 112 - -
Ssu6g3036 592 SUPERFAMILY PLC-like phosphodiesterases 118 445 IPR017946 GO:0006629|GO:0008081
Ssu6g3036 592 PRINTS Phospholipase C signature 558 568 IPR001192 GO:0035556
Ssu6g3036 592 PRINTS Phospholipase C signature 403 421 IPR001192 GO:0035556
Ssu6g3036 592 PRINTS Phospholipase C signature 382 403 IPR001192 GO:0035556
Ssu6g3036 592 PRINTS Phospholipase C signature 123 141 IPR001192 GO:0035556
Ssu6g3036 592 PRINTS Phospholipase C signature 246 263 IPR001192 GO:0035556
Ssu6g3036 592 PRINTS Phospholipase C signature 149 169 IPR001192 GO:0035556
Ssu6g3036 592 MobiDBLite consensus disorder prediction 268 291 - -
Ssu6g3036 592 Gene3D Phosphatidylinositol (PI) phosphodiesterase 115 456 IPR017946 GO:0006629|GO:0008081
Ssu6g3036 592 MobiDBLite consensus disorder prediction 309 325 - -
Ssu6g3036 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3036 592 CDD C2_PLC_like 462 592 - -
Ssu6g3036 592 CDD PI-PLCc_plant 117 431 - -
Ssu6g3036 592 SMART C2_3c 464 572 IPR000008 -
Ssu6g3036 592 Pfam Phosphatidylinositol-specific phospholipase C, X domain 120 262 IPR000909 -
Ssu6g3036 592 Pfam C2 domain 464 566 IPR000008 -
Ssu6g3036 592 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3036 592 MobiDBLite consensus disorder prediction 303 326 - -
Ssu6g3036 592 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 464 591 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3036 Ssu-Chr6 69539227 69544609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3036 3 592 Acyl Lipid Metabolism Gene Families AT2G40116 61.211 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3036 K05857 - gmx:100777010 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3036 6 69539227 69544609 Ssu6g3036 6 69539227 69544609 ECH
Ssu9g1593 9 52256017 52262679 Ssu6g3036 6 69539227 69544609 PCT