Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1592 ATGGAAACAGAGAAAAACAGAGGCTCTGATTCGAAGGGAAGGGTGAGAATGAAAATGGAAACATTCACGATCAAGGTGTTAAAATTCTTGACCAAAAAAGGTGAAGTCAACAAGGCAGAACCACCTCTGGACCTTAAGGAAGCCTTTTCCAAGTTTGCCAGAGGGAACCAAATGAAGAAGGATCAGCTCCTTCGGTTCATGGTGGAGCACCAGGGAGAAAACATCAGCACCATAGAAGATTTGGATAAAATagttgaaaaggttttgcaagtTGGGAGTTCTAGCACTAAAACTAGCACTACAAGATTTGTGGATGTGTATAGGAAACATGGATTAAGTCTCAATGACTTCATCGATTTTCTGCTTCTTGATGATTTCAACGGTCCCTTGAAAGACGAGGTACATCATGATATGAATGCTCCCTTGTCACATTATTTCATGTACACGGGACACAATTCCTACCTGACTGGGAATCAACTTACCAGTGAGAGCAGTGACGAGCCAATTATAGAGGCTTTGCAGCAAGGTGTAAGAGTGATTGAACTAGATTTATGGCCATCTAAATCTTCAACTAAAGATGGAATTAAAGTGGTTCACGGAAGGACTCTTACCACTCCAGTCTCACTATCCAAATGTCTAGAATCCATAAAGGAATATGCATTTTACAAATCTGATTATCCAGTAATTCTAACTTTGGAAGACCACCTAACACCAAAACATCAGCTTAAATTTGCAGACATGGCAACTCAAATATTTGGAGAAATGCTTTATTGTCCTCGGACAGATTATTTGACAGAATTCCCCTCACCAGAATCATTGAAAAAACGGATAATTATATCAACCAAACCACCAAAGGAATATCCGCAATTTGATAGTATCAGCAAACCTATGCCAAATGGAAGCGAACCGTCTGAAGAAGAATCATGGGGACAGGAATTGCAGGACTCTCTGGCTAAACTGAACATTGAGGACAAGAATGAAAGTGATGAAGATCAGGAAGATATAAATACAAGTGATAACAAACCAAACCAACAAGGTGCACGTCAATACAAACACTTGATTACAATCCATGGTGGGAAATCAAAAGGTTCTATGAAGGATCGACTGAAAGATAATACTAAAGTTAGACGACTAAGTTTGAGTGAGAAGAAACTCAAAAGTGCTTCTGAGACTCATGGAGCCGACCTTATTAGGTTCACACAGAAAAATATCCTCAGAGTCTATCCTAAGGGAGAACGTGTCCAATCCTCAAATTTCAGGCCATATTTAGGGTGGCTGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGTCATGGCAAATCACTCCGGTTGATGCAGGGGATGTTTAGAGCAAATGGAGGGTGCGGTTATGTTAAAAAGCCTGAATTTCTGATCCGAACACTGCCACATGAAGAGGTGTTTGATCCTAAAAAAGCACTGCCAGTGAAGCAGATATTAAAAGTAAAAGTATATAAAGGAGATGGCTGGAGTTCAGATTTCAGTGCAACACACTTTGATCTATTCTCTCCACCAGACTTTTACACAAAGGTCTGTATTGTTGGAGTGCCAGCTGATTCTGTCAAAATGAAAACCAGTGTAAAGATGGACACTTGGTATCCTGTTTGGGATGAAGAGTTTGAATTCTCATTGAGGGTTCCAGAACTTGCTTTGCTTCGGATAGAAGTAAAGGACAAAGATGATGGAAAGGATGACTTTGCGGGACAAACTTGTTTGCCAATATCAGAGCTAAGGCATGGATTTCGGTCAGTTCCTCTGTATGACCgaaagggaaagaaatttaGATCTGTGAAGCTTCTAATGCGCTTTAAGCTTGAATATATTGTATTGTAA 1854 0.3948 METEKNRGSDSKGRVRMKMETFTIKVLKFLTKKGEVNKAEPPLDLKEAFSKFARGNQMKKDQLLRFMVEHQGENISTIEDLDKIVEKVLQVGSSSTKTSTTRFVDVYRKHGLSLNDFIDFLLLDDFNGPLKDEVHHDMNAPLSHYFMYTGHNSYLTGNQLTSESSDEPIIEALQQGVRVIELDLWPSKSSTKDGIKVVHGRTLTTPVSLSKCLESIKEYAFYKSDYPVILTLEDHLTPKHQLKFADMATQIFGEMLYCPRTDYLTEFPSPESLKKRIIISTKPPKEYPQFDSISKPMPNGSEPSEEESWGQELQDSLAKLNIEDKNESDEDQEDINTSDNKPNQQGARQYKHLITIHGGKSKGSMKDRLKDNTKVRRLSLSEKKLKSASETHGADLIRFTQKNILRVYPKGERVQSSNFRPYLGWLYGAQMVAFNMQGHGKSLRLMQGMFRANGGCGYVKKPEFLIRTLPHEEVFDPKKALPVKQILKVKVYKGDGWSSDFSATHFDLFSPPDFYTKVCIVGVPADSVKMKTSVKMDTWYPVWDEEFEFSLRVPELALLRIEVKDKDDGKDDFAGQTCLPISELRHGFRSVPLYDRKGKKFRSVKLLMRFKLEYIVL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1592 617 ProSiteProfiles C2 domain profile. 466 595 IPR000008 -
Ssu9g1592 617 Gene3D - 40 128 - -
Ssu9g1592 617 Pfam C2 domain 486 586 IPR000008 -
Ssu9g1592 617 SMART plcy_3 350 466 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1592 617 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 19 614 - -
Ssu9g1592 617 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 614 IPR001192 GO:0035556
Ssu9g1592 617 Pfam Phosphatidylinositol-specific phospholipase C, X domain 138 282 IPR000909 -
Ssu9g1592 617 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 136 282 - -
Ssu9g1592 617 PRINTS Phospholipase C signature 167 187 IPR001192 GO:0035556
Ssu9g1592 617 PRINTS Phospholipase C signature 141 159 IPR001192 GO:0035556
Ssu9g1592 617 PRINTS Phospholipase C signature 404 425 IPR001192 GO:0035556
Ssu9g1592 617 PRINTS Phospholipase C signature 425 443 IPR001192 GO:0035556
Ssu9g1592 617 PRINTS Phospholipase C signature 266 283 IPR001192 GO:0035556
Ssu9g1592 617 PRINTS Phospholipase C signature 579 589 IPR001192 GO:0035556
Ssu9g1592 617 MobiDBLite consensus disorder prediction 294 313 - -
Ssu9g1592 617 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 372 464 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1592 617 SUPERFAMILY PLC-like phosphodiesterases 136 467 IPR017946 GO:0006629|GO:0008081
Ssu9g1592 617 SMART plcx_3 136 282 IPR000909 -
Ssu9g1592 617 CDD C2_PLC_like 484 613 - -
Ssu9g1592 617 Gene3D C2 domain 481 616 IPR035892 -
Ssu9g1592 617 MobiDBLite consensus disorder prediction 325 347 - -
Ssu9g1592 617 MobiDBLite consensus disorder prediction 284 313 - -
Ssu9g1592 617 Gene3D Phosphatidylinositol (PI) phosphodiesterase 132 479 IPR017946 GO:0006629|GO:0008081
Ssu9g1592 617 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 379 465 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1592 617 SMART C2_3c 486 593 IPR000008 -
Ssu9g1592 617 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 486 611 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1592 Ssu-Chr9 52250261 52254120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1592 21 613 Acyl Lipid Metabolism Gene Families AT2G40116 55.016 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1592 K05857 - gmx:100803435 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1592 9 52250261 52254120 Ssu6g3035 6 69455388 69520351 PCT