Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1577 atgttacCCCAGAAGCAAGCAGAAGAAGCCATGATGTCAAGCCTCACCCAAACGATTGAGCGTGAGGAGGGAGAGCGAGAGGAAGTGAAAGGGGAGGCCTCACATTTTAGCTTCAAAAATCTTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTGACTCTGCCTTACTCTTTCTCTCAGCTGGGAATGCTTTCAGGCATCATATTCCAAATCTTCTATGGCTTGCTTGGTAGTTATACTGCTTATTTAATTAGCATCCTGTACATTGAGTATAGAAGCCGGAAGGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGCTTACTGGGTCCATACTGGAAAGCTATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTTATAGCTTGTGCAAGCAACATATACTACATAAATGACCACTTGGACAAGAGGACATGGACCTACATTTTTGGAGCTTGCTGTGCCACCACAGTGTTCATTCCATCATTCCATAACTACAGGATGTGGTCCTTCCTTGGCCTTGGCATGACCACCTACACTGCTTGGTATTTGACCATTGCTGCCCTTGTTCATGGCCAGGTTGAAAATGTGACGCATTCGGGCCCAAACAAGTTGGTTTTGTATTTCACAGGAGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAgaagttcaaatatatatatctttatgcAACTCTCTATGTGTTCACCCTCACTCTACCATCTGCTATTGCCGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCACTCCAATGCCTTCTCACTCCTCCCTCGCTCTGGCTGGCGTGACACTGGTGTCATCCTAATGCTCATTCACCAGTTCATCACATTCGGGTTTGCTTGTACGCCATTGTATTTCGTGTGGGAAAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCTCTAGCCCGGTTACCTGTGGTGATACCAATATGGTTTTTGGCTattattttccctttctttGGCCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTTAGCTTCACCGTTTACATCATCCCTGCTTCTGCCCATATGCTCACCTACAGATCCGCCTCCGCAAGACAGAATGCCGCGGAGAAATTACCCTTCTTTATCCCTAACTGGACAGTCATGTACGTGGTAAATGCATTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTCGGATTTGGAGGGTGGGCCAGCATGACAAATTTCATCAGGCAGGTTGACACATTCGGACTGTTTGCCAAGTGCTACCAGTGCCAGCCGAAAGCCCTGGCCTCCAACCACACCTTGCATCGCTGA 1443 0.465 MLPQKQAEEAMMSSLTQTIEREEGEREEVKGEASHFSFKNLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQIFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRMWSFLGLGMTTYTAWYLTIAALVHGQVENVTHSGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYRSASARQNAAEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIRQVDTFGLFAKCYQCQPKALASNHTLHR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1577 480 Coils Coil 5 32 - -
Ssu9g1577 480 PANTHER OS05G0424000 PROTEIN-RELATED 2 470 - -
Ssu9g1577 480 PANTHER AUXIN INFLUX TRANSPORTER 2 470 - -
Ssu9g1577 480 Pfam Transmembrane amino acid transporter protein 44 437 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1577 Ssu-Chr9 52023690 52027585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1577 4 467 Organic Solute Cotransporters AT2G21050 76.724 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1577 K13946 - gmx:100795466 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1577 9 52023690 52027585 Ssu6g3022 6 69235273 69239598 PCT