Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1575 ATGCCACCCAACATTCCCAGTCGACACGGCTTTCTACTACTTAATTTCCTTCCTCTTTCAAATATCCCAAACCATCACTCCTCTCCTTCATTTCATATAAATACCTTCCTCTCTTCCCTCGTCCATTTCAATTCCGCAACACAACACAACAGCGACTccttggaaaaaaaagaaaatcattttatttttttcctcccaAAATGGTTGATTTACACTGGAAATCAAAGATGCCAAGTTCCGACATGTCTTCCAAATCTCCAAAACTCTCTCCCCGACAAGTCCTTACCCTCTTTGCAACTACCCTTCCGCAGCACAGATATCTCTTCCGCCGCACCTTCACTTTGTGCTGCTTACGACTACTATCTCTGTCTCCCAGAGCTCAGAAAGCTTTGGAACTCGAGAGACTTTCCAAACTGGAACAACGAACCAATTATAAAACCTGCTTTGCAAGCTCTCGAAATCACGTTCCGTTTTCTTTCCACCGTTCTCTCCGACCCTCGACCTTATTCGAACCGCAGAGAATGGAACCGCAGGATAGAGTCTCTTGCCATTCGTCAGATCGAAATCATCGCCGTGCTCTGCGAGGACGAGGAACACAATTCTGAGACACGTGGCACTGCACCAACCGCTGATCTCAGTAGCGACAACCGCGAGAGCAGAAGCTACTGCGAGGCGAGCCTGCTTCCGCGGCTCGCCACGTGGTACAAATCCAAGGACGTATCGCAGAGGATCCTCCTCTCCGTGGAATGCCAAATGAGGAGGTGTCCGTACACGCTAGGTCTGGGCGAGCCGAACCTGGCCGCGAAGCCGAGCCTGCTGTACGACCGCGTGTGCAAACCGAGCCAAATCCACGCGCTGAAGACGACGCCGTACGACGACCGCGTGGAGAACCACGAGAACCACGCGGTGCACGCGACGCAACAGATCGCGGAGTCCTGGATCCACGCGTCGCGGAAGCTTCTCGAAAGGATCGCGGACGCGATCCTTTCGCGAAGGTTCGAGAAGGCCGCGGAGGACTGCCACGCGGTGGAGCGGATCTGGAAGCTTCTCGCGGAGGTCGAAGACCTCCACCTGATGATGGATCCGGACGATTTCCTGAGGCTGATGAAGAACCAGCTCTCGGTGAAGCCGTCGAGCGGCGAAACGGCGTCGTTTTGCTTCAGGTCGAAGGAACTGGTGGAGCTGACGAAGCTGTGCAGAGATCTCAGGCACAAGGTGCCGGAGATattggaggtggaggtggatcCCAAGGGCGGACCGAGGATTCAAGAAGCGGCGATGAAGCTCTACGTGGCGAAGAGCGGGTTCGAGAAGATTCACGTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGGTTCTTCTACGCCTACAAGCAGGTTTTGGCGGTGGTGATGGGGAGCTCCGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACGCGGGTGACTCGTTGACTCAGATTTTCCTTGAGCCTACGTATTTTCCAAGCTTGGACGCCGCCAAGACTTTCCTTGGGTACTTGTGGGATAATAACGATAACAAATGGGTGTGA 1560 0.5218 MPPNIPSRHGFLLLNFLPLSNIPNHHSSPSFHINTFLSSLVHFNSATQHNSDSLEKKENHFIFFLPKWLIYTGNQRCQVPTCLPNLQNSLPDKSLPSLQLPFRSTDISSAAPSLCAAYDYYLCLPELRKLWNSRDFPNWNNEPIIKPALQALEITFRFLSTVLSDPRPYSNRREWNRRIESLAIRQIEIIAVLCEDEEHNSETRGTAPTADLSSDNRESRSYCEASLLPRLATWYKSKDVSQRILLSVECQMRRCPYTLGLGEPNLAAKPSLLYDRVCKPSQIHALKTTPYDDRVENHENHAVHATQQIAESWIHASRKLLERIADAILSRRFEKAAEDCHAVERIWKLLAEVEDLHLMMDPDDFLRLMKNQLSVKPSSGETASFCFRSKELVELTKLCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVAKSGFEKIHVLQAMQAIEAAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDAGDSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDNKWV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1575 519 Gene3D - 272 506 - -
Ssu9g1575 519 Pfam Hs1pro-1 protein C-terminus 252 513 IPR009743 -
Ssu9g1575 519 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 274 507 IPR037217 GO:0019441|GO:0020037|GO:0046872
Ssu9g1575 519 Pfam Hs1pro-1 N-terminus 85 249 IPR009869 GO:0006952
Ssu9g1575 519 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 93 516 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1575 Ssu-Chr9 51984269 51985828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1575 - - gsj:114396435 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1575 9 51984269 51985828 Ssu6g3018 6 69173985 69175352 PCT