Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1566 ATGACGGAGGATCGGAACGTGCGGAAGACACGTGTGGTGGACGTGGTCCTCGACTGCGTCATCCCCTACATCGACGACCCCAAGGACCGCGACGCGGTTTCCCAAGTGTGTCGGCGCTGGTACGAGCTTGACTCGTTGACCCGGAAGCACGTGACCATCGCGCTCTGCTACACCACCACGCCGGCGCGGCTCCGGCGCCGCTTCCCGCACCTCGAGTCGCTCAAGCTGAAGGGGAAGCCCAGAGCCGCAATGTTCAACTTGATACCCGAGGACTGGGGAGGTCACGTGACCCCCTGGGTTAGGGAGATTTCTCAGTACTTCGATTGCCTCAAGAGCCTCCACTTCCGCCGTATGATTGTCAAAGACTCCGATCTTCAGCTCCTCGCTCGCTCGCGCGGTCACGTGCTTCACGCTCTCAAGCTTGACAACTGCTCTGGTTTCTCCACCGATGGACTTCTCCATATTGGTCACTTTTGCGAGAATTTAAGAGTCTTGTTTTTGGAGGAAAGCTCAATTGTTGAGAAGGACGGAGAATGGCTACATGAGCTTGCTTTGAATAATACAGTTCTTGAGACTCTCAATTTTTACTTGACAGATATTGCTGATGTCAAGATTCAGGACCTTGAACTTCTAGCCAAAAATTGCCCCAACTTGGTGTCTGTCAAACTAACTGATTGTGAAATACTGGATCTTGTGAACTTCTTTAAGCATGCCTCTGCTCTGGAAGAGTTTTGTGGAGGTACCTACAATGAGGAACCAGAAAGATACTCCGCTATATCACTACCAGCAAAGTTATGTCGATTGGGTTTAACATATATTGGAAAGAATGAGTTGCCCATAGTGTTCATGTTTGCAGCCGTACTAAAAAAATTGGATCTCCTCTATGCGATGCTGGACACGGAGGATCATTGTATGTTAATCCAAAGGTGTCCAAATCTGGAAGTCCTTGAGGAGGCTAAAAGGCTTAGGATTGAACGGGGTGATGATGATCAAGGAATGGAGGATGAAGAAGGTACTGTTTCCCATAGAGGGCTAATAGCCCTGTCACAGGGCTGTTCAGAGCTTGAATACATGGCTATTTACGTGTCCGACATTACAAATGCATCTCTGGAACATATTGGTACTCACTTGAAAAACCTCTGCGATTTTCGCTTAGTGTTGCTTGATCAAGAAGAGAAAATAACTGATTTGCCACTTGACAATGGGGTGCGGGCTCTACTGAGGGGCTGTGACAAGCTGAGAAGATTTGCTCTATATCTCAGGCGTGGGGGGTTGACTGATGTGGGTCTTGGTTACATTGGGCAGTACAGCCCAAATGTGAGATGGATGCTGCTTGGTTATGTGGGGGAGTCTGATGCAGGGCTTTTGGAGTTCTCTAAGGGCTGTCCTAGTCTTCAGAAACTTGAAATGAGAGGGTGTTCTTTTTTCAGTGAACATGCACTTGCTGTGGCTGCAACACAATTGACTTCTCTTAGGTACTTGTGGGTGCAAGGGTATGGTGCATCTCCATCTGGACGTGATCTTTTGGCAATGGCTCGCCCATTTTGGAACATTGAGTTGATTCCTTCTAGAAAGGTGGCTATGAATAACCATCCGGATGAGACTCTAGTTGAGCATCCAGCTCATATTCTTGCATATTACTCTCTTGCAGGGCAAAGATCAGATTTTCCAGATACTGTTGTGCCTTTGGAGCCTGCCACGTGTGTTGACGCCTAG 1716 0.4837 MTEDRNVRKTRVVDVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVREISQYFDCLKSLHFRRMIVKDSDLQLLARSRGHVLHALKLDNCSGFSTDGLLHIGHFCENLRVLFLEESSIVEKDGEWLHELALNNTVLETLNFYLTDIADVKIQDLELLAKNCPNLVSVKLTDCEILDLVNFFKHASALEEFCGGTYNEEPERYSAISLPAKLCRLGLTYIGKNELPIVFMFAAVLKKLDLLYAMLDTEDHCMLIQRCPNLEVLEEAKRLRIERGDDDQGMEDEEGTVSHRGLIALSQGCSELEYMAIYVSDITNASLEHIGTHLKNLCDFRLVLLDQEEKITDLPLDNGVRALLRGCDKLRRFALYLRRGGLTDVGLGYIGQYSPNVRWMLLGYVGESDAGLLEFSKGCPSLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPSGRDLLAMARPFWNIELIPSRKVAMNNHPDETLVEHPAHILAYYSLAGQRSDFPDTVVPLEPATCVDA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1566 571 Pfam F-box 10 50 IPR041567 -
Ssu9g1566 571 Gene3D - 2 48 - -
Ssu9g1566 571 Gene3D Ribonuclease Inhibitor 49 567 IPR032675 -
Ssu9g1566 571 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 566 - -
Ssu9g1566 571 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Ssu9g1566 571 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 566 - -
Ssu9g1566 571 SUPERFAMILY RNI-like 109 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1566 Ssu-Chr9 51799060 51802769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1566 K13463 - gmx:100779171 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1566 9 51799060 51802769 Ssu6g3003 6 68872592 68877919 PCT