Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1551 ATGGGGAGAGGAGACATTGAACTTGACTCAAACAAGGTCTGTGACGAGGATGCAGGGGGCGTTGAAGTCCCAGATACCGCTCATCAGATTAGCAGCGATTCATGGTTTCAAGTAGCTTTTGTCCTCACGACCGGAATCAACAGTGCCTATGTGCTTGGATATTCTGGGACCATCATGGTTCCGCTGGGTTGGACCGGGGGTGTGGTTGGTCTAGTTCTTGCTACCATAATTTCACTCTATGCAAATGCTCTAATTGCTCATCTTCACGAATATGGAGGGCAAAGGCACATTAGGTATAGAGATCTTGCTGGATATATATACGGTAAGAAAGTCTATTCTCTCACATGGGCTCTGCAGTATGTCAATCTTTTCATGATAAATACTGGCTTCATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATGTTCTATTCAGGGATGATGATCAGCTGAAGCTTCCATATTGTATTGCTATAGCTGGACTTGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTTGGAATTTGGCTAGGATTTTCAACAGTCTTCAGCCTAGCATATATTGTTATAGCTTTTGTACTGTCACTTAAAGATGGATTACAATCACCCCCTCGAGATTACGACATTCCAGGAGATggtataagtaaaatatttacaataattggGGCATCAGCTAACCTCGTGTTTGCATATAATACTGGCATGCTTCCTGAGATACAGTTTACTGTTGGAGTTCTACCATTGTACCTGGTTACCTTTACAGGATACTGGGCTTATGGATCTTCCACAGCAGTGTACTTGCTGAATAGTGTGAATGGTCCAATCTGGGTGAAGGCCTTGGCCAATATCACAGCCTTTCTTCAATCAGTCATTGCATTGCATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGCGCACTGAATGTTAAAAACATGTCATTTCGAATCGGGGTAAGAGGTGGCTACCTGGCCTTTAACACGTTTGTGTCGGCTTTGCTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGGGCGATCAGCACATTTCCCCTCACATTTATTCTTGCAAACCATATGTACCTTGTGGCAAAGAAGTACAAACTAACAAGCTCACAAAAGCTTTGGCACTGGGTCAACATTTGTTTCTTTGGAATTATGTCTCTTGCAGCAACAATTGCAGCCATACGGCTCATTGCCGTAGACTCCAAAACATACCATGTTTTTGCTGATCTGtga 1272 0.4237 MGRGDIELDSNKVCDEDAGGVEVPDTAHQISSDSWFQVAFVLTTGINSAYVLGYSGTIMVPLGWTGGVVGLVLATIISLYANALIAHLHEYGGQRHIRYRDLAGYIYGKKVYSLTWALQYVNLFMINTGFIILAGSALKATYVLFRDDDQLKLPYCIAIAGLVCAMFAICIPHLSALGIWLGFSTVFSLAYIVIAFVLSLKDGLQSPPRDYDIPGDGISKIFTIIGASANLVFAYNTGMLPEIQFTVGVLPLYLVTFTGYWAYGSSTAVYLLNSVNGPIWVKALANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNVKNMSFRIGVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKYKLTSSQKLWHWVNICFFGIMSLAATIAAIRLIAVDSKTYHVFADL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1551 423 PANTHER PROLINE TRANSPORTER 1 17 418 - -
Ssu9g1551 423 Pfam Transmembrane amino acid transporter protein 249 406 IPR013057 -
Ssu9g1551 423 Pfam Transmembrane amino acid transporter protein 33 246 IPR013057 -
Ssu9g1551 423 PANTHER OS05G0424000 PROTEIN-RELATED 17 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1551 Ssu-Chr9 51628905 51631767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1551 59 423 Organic Solute Cotransporters AT3G55740 72.585 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1551 - - gmx:100778997 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1551 9 51628905 51631767 Ssu6g2989 6 68712215 68715374 PCT