Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2989 ATGGTTCCCCTGGGTTGGGCAGGGGGCGTGGTCGGTTTGATTCTCGCCACCGCAATATCGCTCTATGCAAATGCTCTTATTGCTAGGCTCCATGAATTTGGAGGAACAAGGCATATTCGATACAGAGATCTTGCTGGATTTATATATGGTAGAAAAGCTTATTCGCTCACATGGGCTCTGCAGTATGTCAATCTTTTCATGATAAATGCCGGCTACATCATTTTGGCTGGTTCGGCTTTAAAGGCCGGTTATATTCTATTTAGGGATGAAGATGGGATGAAGCTACCGTATTTTATTGCTATAGCTGGATTTGTGTGTGCAATGTTTGCCATTTGTATTCCCCATCTATCGGCTCTTGGAATTTGGCTGGGATTTTCAACAGTCTTCAGCCTAGTGTATATTGTTATAGCGTTTGTGCTGTCAATTAAAGATGGTATAAAATCACCTGCTCGTGATTATAGTATTCCGGGGACatcaataagtaaaatatttacaacaatTGGGGCGTCTGCTAATCTTGTGTTCGCATATAATACAGGAATGCTTCCTGAGATACAGGCAACCATCAGGCAGCCAGTTGTCAAGAACATGATGAAAGCCCTGTACTTTCAGTTTACCGTTGGAGTTCTGCCATTATATCTGGTAACCTTCGCAGGATACTGGGCTTATGGATCTTCAACAGCAACCTATTTGCTGAGTGATGTCAATGGTCCAGTCTGGGCTAAGGCCATGGCCAATATTTCAGCCTTCCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTGGGATACCAAGCATGGGATCAAAGGGAGCGCGCTGGCTGTTAAGAACTTGTCATTTCGAGTCTTGGTAAGAGGTGGCTACCTGACTTTAAATACATTTGTATCAGCTCTATTGCCATTTCTTGGAGATTTCATGAGCCTCACTGGAGCGATCAGCACATTTCCCCTTACATTTATCCTTGCAAACCATATGTACCTAGTGGCAAATGAGAACAAACTAACACCCATCCAAAAGCTCTGGCATTGGATCAATATTTGTTTCTTTGGCATCATGTCTGTTGCAGCAACTATTGCAGCCCTGCGGCTTATCGCTGTAGACTCCAAAACGTACCATGTTTTTGCggatttatga 1152 0.4219 MVPLGWAGGVVGLILATAISLYANALIARLHEFGGTRHIRYRDLAGFIYGRKAYSLTWALQYVNLFMINAGYIILAGSALKAGYILFRDEDGMKLPYFIAIAGFVCAMFAICIPHLSALGIWLGFSTVFSLVYIVIAFVLSIKDGIKSPARDYSIPGTSISKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTATYLLSDVNGPVWAKAMANISAFLQSVIALHIFASPMYEYWDTKHGIKGSALAVKNLSFRVLVRGGYLTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANENKLTPIQKLWHWINICFFGIMSVAATIAALRLIAVDSKTYHVFADL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2989 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
Ssu6g2989 383 Pfam Transmembrane amino acid transporter protein 1 367 IPR013057 -
Ssu6g2989 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2989 Ssu-Chr6 68712215 68715374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2989 1 383 Organic Solute Cotransporters AT2G39890 76.762 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2989 - - gmx:100500168 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2989 6 68712215 68715374 Ssu6g2989 6 68712215 68715374 ECH
Ssu9g1551 9 51628905 51631767 Ssu6g2989 6 68712215 68715374 PCT