Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1541 ATGGGTGACACCGGCCTCTGGCTTCCGTCGCAGTTCCTCGCCGGCGACGGGGAGGGGGACATGAAAAACAGCGACAAAAGCCTCGCGAACGCCTTTTTCGGCTTCCCCTCGGAGTTCCCCTACGAGTTCGGAGTGTCCTCTCCGGCGGTGGAGTCCGTGGCGGGGTCGACGGAGACGGAGAGCAGCGACGGCGAAGAGGACTTCTTCGCGGGCCTGACTCGGCGACTGAGTCAGTCCTCGCTTCACGAAACTCGGAAGCAACTCACCGCCGTCCCTGTCAGCGACGTATCAACGTTTTCGGAGATTCCGAGGAAGACTCGGGGTTTGGTCGGGTCGCCCCAGTCGACGCTCACCGGAATCGGTAGCTGGTCGGGCCGGAGCGCCATCTCCGGCGACGGAAGCCCGACCGGTAGCGGGTTACTCACTCGTCCTCGCCCTAACGGGCCTAACCAGAGTTTCAATCAGGTTCAGGAGCAGGTGCGACCGAAGCAGCAGTGTGGTTCGGTTTGGGGAAGGCCAGCGAAGCCTAACTGGTTGGTTCAGCAGCAGCAGTTGTTACAGGTTCGGAGCAGAGCGCGTTGCACTCGTCCTTTGTGTTTGCCCCAATCCGTGTGGTCCCCTTTGCAAGTTCAGCAACAAAACAATAATCGGGTGCAGTTTGGCGGATCCGGGTCGCGGGTTGTTGTACCGGGTGGATCTTCTGTGAAAAGGGGGTGTGCTGGAACTGGGGTGTTCTTGCCTCGCCATTATGAAGCCCCTTCTGAACCTCGCAAGAAAACAGGTTGTGCGCCTGTTTTGTTACCGGCAAAGGTTGTTCATGCGCTGAACTTGAGTATTGATGACCTGAATGGGACTAGCCAACAGCGTTTCTCGAATGCTTTTGCTACGGATTATGATGCGATTTTAGCGAGGAGAAACGCGCTTCTCATGCAGCAGAGGTTAAGTGTTCGGCGAGAAGATGCGGCTAACTATGAAATTCGCCTACCTCAAGAGTGGACTTACTGA 1005 0.5731 MGDTGLWLPSQFLAGDGEGDMKNSDKSLANAFFGFPSEFPYEFGVSSPAVESVAGSTETESSDGEEDFFAGLTRRLSQSSLHETRKQLTAVPVSDVSTFSEIPRKTRGLVGSPQSTLTGIGSWSGRSAISGDGSPTGSGLLTRPRPNGPNQSFNQVQEQVRPKQQCGSVWGRPAKPNWLVQQQQLLQVRSRARCTRPLCLPQSVWSPLQVQQQNNNRVQFGGSGSRVVVPGGSSVKRGCAGTGVFLPRHYEAPSEPRKKTGCAPVLLPAKVVHALNLSIDDLNGTSQQRFSNAFATDYDAILARRNALLMQQRLSVRREDAANYEIRLPQEWTY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1541 334 MobiDBLite consensus disorder prediction 121 159 - -
Ssu9g1541 334 PANTHER TIP41-LIKE PROTEIN 164 334 - -
Ssu9g1541 334 PANTHER TIP41-LIKE PROTEIN 27 148 - -
Ssu9g1541 334 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 164 334 - -
Ssu9g1541 334 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 27 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1541 Ssu-Chr9 51467674 51469175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1541 - - vra:106757577 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1541 9 51467674 51469175 Ssu6g2983 6 68576755 68578253 PCT