Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1539 ATGGATGCTTTAGCAAAGAAGGACGAAAAttctcaaaagaaaagagatggGGTTCGGTCTTGTCTCACAGATTCGAGTGCAGAGTCTAGGGAAACTAGTTTCTGTGGATCCAGTTCCTCAGTTTCTACTGAAGAAGTAAAGGCAAAAGGGTCTTCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCAAGGCGTCAATCTCCAATCGCTCAAATtctgatgaaaaagaaaacaaacataagTCCCACTTGGAAGATACAAAATtcaccagtattggtttgaagcTGTCagaAGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTCGGTGAAGATATGTCAGGTTGTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCAAATGCCGTTACTAATCTGTGCGCAACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCTTctgagaagaaagaaatgtgGCAGAGAGAGATGGAATGGCTTGTTAGTGTCAGTGATTACATTGTCGAGTTAATGCCTTCCTGGCAAACATTTCCTGATGGGAGTAAGCTTGAGGTAATGACTTGCAGGCCTAGGACagatatttttatcaatcttCCAGCTCTTCGCAAACTTGACAACATGCTTCTCGAAATTTTAGACAGTTTCACTGCCACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCCCAGATGCAGATGGTTCGGCCTCTTTTCGCAAAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCTGTACCTCGTGTTCCCCCTGCAGGACTCGGTGAAGACTCAAGAAAGCAGTTGAATCACTCTCGAGAATGTGCAAACCAAATACTAAAAGCGGCCATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCGTATTTGGAAGTACTTCCCAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCCGGAGTGCCTTCTTGATTGCTTAGACATCTCCTCTGAACATGTTGCACTAGAGATTGCTAACCGTGTGGAAGCAGCAATTTATGTATGGCGGAGAAGAGCTCACTCCAGGTCCTCACCTAACCCCAACCGTTCCACTACGAAATCATCATGGGAAATGGTCAAGGACTTCATGGTTGATGGAGATAAGAGAGAACTGCTAGCAGATAGAGCTGAAAACATTCTAGTGTCCTTGAAGCAGCGGTTCCCAGGCTTAAGTCAAACTACCCTTGATACTAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCGTGTTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCTTTTAACATTGTGGCCCGCATTGATGATTTGCTGTATGTGGATGACTTGACCAAACATTCAGAGAGGTTTGCATTGGTTCCTACTACTACAGTTAACGTGGTTTCTCAGCAGAAGGTTACACGTCCACTCTCAGTGTCTGTCTCAGGCACTACTCCACACAAAGCAGCAGTTGGCACACCTAGCTTTTCGCCTGCTACTGCGCCGCTAATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTcctcaacaacaataacaacggCATCAAACCTCATCGTCGTGGCTTTGGGGTGAGGAGAGTGTTGTCAAATTATCTCGGAGTAGAGACAAAGACTAAGATATGCAGCAACTCAACTGAGGTGAATTGTTCCAACCCAAGTAGCAAGAAAACTGAACAACAACCAGAACAACGTCAGAAGGAATCATGCACCCTGAAAAACAGGACCAAATGA 1788 0.4217 MDALAKKDENSQKKRDGVRSCLTDSSAESRETSFCGSSSSVSTEEVKAKGSSSPAPLGWPILKASISNRSNSDEKENKHKSHLEDTKFTSIGLKLSEVDMMKERFAKLLLGEDMSGCGKGVCTALAISNAVTNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTFPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAPDADGSASFRKTIQRQEEKWWLPVPRVPPAGLGEDSRKQLNHSRECANQILKAAMAINSIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSRSSPNPNRSTTKSSWEMVKDFMVDGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTTVNVVSQQKVTRPLSVSVSGTTPHKAAVGTPSFSPATAPLISPARGERTPFLNNNNNGIKPHRRGFGVRRVLSNYLGVETKTKICSNSTEVNCSNPSSKKTEQQPEQRQKESCTLKNRTK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1539 595 MobiDBLite consensus disorder prediction 563 595 - -
Ssu9g1539 595 MobiDBLite consensus disorder prediction 22 49 - -
Ssu9g1539 595 ProSiteProfiles PRONE domain profile. 88 470 IPR005512 GO:0005085
Ssu9g1539 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 16 566 IPR038937 GO:0005085
Ssu9g1539 595 MobiDBLite consensus disorder prediction 1 21 - -
Ssu9g1539 595 MobiDBLite consensus disorder prediction 1 54 - -
Ssu9g1539 595 MobiDBLite consensus disorder prediction 491 535 - -
Ssu9g1539 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 16 566 - -
Ssu9g1539 595 MobiDBLite consensus disorder prediction 563 577 - -
Ssu9g1539 595 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 464 IPR005512 GO:0005085
Ssu9g1539 595 MobiDBLite consensus disorder prediction 578 595 - -
Ssu9g1539 595 Gene3D PRONE domain, subdomain 1 329 470 - -
Ssu9g1539 595 Gene3D PRONE domain, subdomain 1 92 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1539 Ssu-Chr9 51399939 51402799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1539 - - gmx:100796692 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1539 9 51399939 51402799 Ssu6g2982 6 68522847 68525901 PCT