Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1520 ATGAACACCCCAATGACCGGCGATTTTCTCCGGACACCCCTCACTGTCAAGATCGCCGCTTTCTTCTTCATCGCCGTCACCTTCTTCTACTTCGGCAAGCACTGGTCCGATGGCTACCAACAACTCGTCTTCTTCACCCAACGCACCGACCCCAACCCGGTCGTATCCACGTCGCCGAATTACGCCAAGTCCTTCAACCTCTCCGCCCTAATCGACCAGAACAACACCCAACCGCCGCCGGAAGAAGCCCCAGCCCCGCCAGAGCCGGCGCCGGAGGGTTCGATCGAGAAACTGGGGGTCGTGAACGAGAATGGCACGATGTCCGATGAGTTCGAGGTGGGGGATTTCGATCCGGGTATGGTGGATCAGTGGGTGAACGAGACGCAGGTTGAGAGCGagggttcttcttcttctgattTCGCATTTGCGATCAAGAAGTTCGGGTTGTGCCCGCGCGAGATGAGCGAGTATATACCGTGTTTGGACAACGAGGACGCGATTCGGAAGCTGCGTTCCACGGAGAAAGGGGAGAGGTTCGAGCGGCATTGCCCCAAGCAAGATCAAGGGCTGAATTGCTTGGTTCCTGCACCCAAAGGGTACCGTACCCCTATTCCGTGGCCCAGAAGCCGAGATGAGgtATGGTACAATAATGTTCCTCATACACGTCTTGTTGAAGATAAAGGCGGCCAAAACTGGATTTCCAGAGACAAGGATAAGTTTAAATTCCCGGGAGGTGGTACGCAGTTTATACATGGGGCAAATGAGTACTTGGGCCATATTGCTAagATGATTCCTGATATTACATTTGGTCAGCATATACGAGTTGTTCTTGATGTTGGCTGTGGTGTTGCTAGTTTTGGGGCGTACTTACTGTCACGGAATGTCGTCACCATGTCTGTTGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTACCAGCAATGGCGGCAGCATTTGCAACTAGACGATTGTTATATCCTAGTCAAGCTTTTGACTTGATACATTGCTCACGCTGTAGAATTAACTGGACTCGAGATGATGGAATCCTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAGCATGAAGAAGTTTTGGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGgaaatttttgaagaaagatGGTTACATTGCAATATGGCAGAAACCTTCTGACAATAGCTGCTATCTAGACCGTGAGGCAGGAACTAAACCTCCGCTGTGTGACCCGAGTGATGACTCAGACAATGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAACGGATATGGAGCAAATGTTACTGAATGGCCTGCACGATTGCAAACCCCACCTGATAGGCTTCAAAGCATAAAACTTGATGCTTTCACATCCAGAGCAGAGCTTTTTAGGGCAGAATCAAAATACTGGAATGATATAATAGCAAGCTATGTTCGTGTTTTACACTGGAAGAAAATGAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCGTTGATTGATCAGAATCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGTCCAAACACCTTGCCTGTTATATATGACCGTGGATTGATTGGAGTTATGCATGACTGGTGTGAGGCATTTGACACCTACCCAAGAACCTATGATTTCCTGCATGCAGCAAACCTACTTTCTGTTGAGAGGAAAAGATGCAATGTCTCATCCATTATGCTTGAGATGGATCGGATACTAAGACCTGGTGGACGCGTATACATCCGTGATTCTATTGAAATCATGGATGAACTTCAAGAGATTGCCAAGGCAATAGGCTGGCACGTGACGTTGCGAGACACGGAGGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCACTTGCTACGCTCTTGA 1995 0.4717 MNTPMTGDFLRTPLTVKIAAFFFIAVTFFYFGKHWSDGYQQLVFFTQRTDPNPVVSTSPNYAKSFNLSALIDQNNTQPPPEEAPAPPEPAPEGSIEKLGVVNENGTMSDEFEVGDFDPGMVDQWVNETQVESEGSSSSDFAFAIKKFGLCPREMSEYIPCLDNEDAIRKLRSTEKGERFERHCPKQDQGLNCLVPAPKGYRTPIPWPRSRDEVWYNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLGHIAKMIPDITFGQHIRVVLDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWKFLKKDGYIAIWQKPSDNSCYLDREAGTKPPLCDPSDDSDNVWYVDLKACISELPKNGYGANVTEWPARLQTPPDRLQSIKLDAFTSRAELFRAESKYWNDIIASYVRVLHWKKMRLRNVMDMRAGFGGFAAALIDQNLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDFLHAANLLSVERKRCNVSSIMLEMDRILRPGGRVYIRDSIEIMDELQEIAKAIGWHVTLRDTEEGPHASYRVLVCDKHLLRS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1520 664 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 16 662 IPR004159 GO:0008168
Ssu9g1520 664 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 496 639 IPR029063 -
Ssu9g1520 664 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 180 395 IPR029063 -
Ssu9g1520 664 PANTHER METHYLTRANSFERASE PMT12-RELATED 16 662 - -
Ssu9g1520 664 MobiDBLite consensus disorder prediction 72 95 - -
Ssu9g1520 664 Gene3D Vaccinia Virus protein VP39 256 418 IPR029063 -
Ssu9g1520 664 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 156 659 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1520 Ssu-Chr9 51011353 51016027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1520 - - gmx:100800414 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1520 9 51011353 51016027 Ssu6g2953 6 67943795 67947456 PCT