Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1510 ATGGCAGAATCAATGGCATGCCATCAACCCTGCCTTGTATCTCCAGCCTTTTTGGATGTGATACGATCAGATGAAACTAGTGCACCTATTACTGGTGTTGCTTTGTCATCTGTTTATAAGATCTTAACTCTAGACGTGATTGATCAACACACCGTCAATGTTGGGGATACCATGCACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAAGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTAGCATGTGTGAAAGGTAAAGCATCTGTAAGGCTGAGTAACCAACACATTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAACGAATAGCACGGTATACAATGCATGAACTGGTTAGGTCTATATTTTTCCACCTTCAGAATATTGACAACACAAAGTGTGCATTCATAAATGGGACTGCTACCTTAAAACAAGAGTCCAATGGACTAAATAATGAGCATGCTTTGGCAAGTGGACAATTGGAAAATGGGAGGCTGAATTCTGCACATGATGCTCAGCCATTATCTCCAGGCATTGCTTCCAGCACTGCAACTGTTGTGACAGTAGCTGTAATGGATGAAAACACAGCTATTGCTAGCAGAGGCAACAAGACTGATCCACACGAATTACAGAGCATGACTGAACCGTATGGGGTTCCCTGTATGGTGGAAATATTTCACTTCTTATGTTCTTTGCTGAATGTCGCTGAGCATATGGGAGTGAATCCTAGATCAAACACAATAACATTTGATGAAGACGTGCCTCTTTTTGCGTTAACTTCGATTAATTCAGCCATAGAGTTGGGAGGAGCTTCCTTTTGCCGTCACCCAAGACTGCTGAGTTTAATTCAGGATGAATTATTCCGCAATCTTATGCAATTTGGTTTATCAATGAGCCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTTGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGGTTGCACAAAGCAAATATGGGGCCTCATATCAGCAACAGGAGGTTGTGATGGAAGCACTTGTTGACTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATGTTAACTTTGACTGTGACATAAGTTGTAGTAACGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAGCGCATTTCCTGTGAACAATCCATTGTCTTCCATACATATTCTTGCTTTGGATGGTCTTATTGCTGTAATGCAGGGAATTGCTGAAAGGATAGGTCGTGGATCTTTAAGTTCAGAACAATCCCCTGTAAATTTTGAGGAGTATACTCCATTCTGGATGGAAAAGTGTGACAGTTTTGGTGACCCAAATGATTGGGTTCCTTTTGTTCGCCGAAGAAAGTACATAAAGAGAAGATTAATGATTGGAGCTGATCACTTCAATCGGGATGTTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTTTTGCCTAACAAACTTGATCCCCAAAGTGTTGCCTTCTTTCTCAGATACACTGCTGGGTTGGATAAGAATCTCATTGGTGATTTCCTTGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTTGGACATTTGATTTCCAAGATATGACCTTAGACACAGCCCTGCGTGTATTTTTGGAGACTTTTAGGCTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATTATATTGCTTAATACAGATCATCATAATGTACAGGTCAAAAAGAAGATGACGGAAGAGGATTTTATCAGGAATAATAGGCATATAAATGATGGCAATGATCTGCCTCGAGAATTCGTGTCAGAGATTTACCATTCAATTTGTAAAAATGAAATCCGTACCACTCCCGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGCACAAGTCAAAAAAAACTGCTCCATTCATTGTATCTGATTCCAGAGCATACTTGGATTATGATTTGTTTGTTGCATTGTCAGGCCCAACAATTGCTGCCATTTCTGTGGTTTTTGATAATGCTGAAAATGAAGAGGTACACCAAACATGTATGGATGGATTCTTAGCTATTGCAAAGATATCAGCCTACTATCATCTTGAAAATGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCATTACCATTTTGGATCCATTATTATTTGAGGAATCTGTCCTGGCCTTTGGAGATGATACAAAAGCAAGAATGGCAACTGAGACGGTTTTCACTATTGCAAATAGGTATGGCGATTACATTCGCACAGGGTGGAGGAATATTCTTGATTGCATCTTAATATTTCACAAGTTAGGCCTCCTTCCTACTCAGTTGGCCAGTGATGCAGCTGATGAGTCACAGGTAACTACAGAAACTGGACATGGGAAGCCTAATTCAAATTCTTCATCATCAACTCATCTTCAATATATGACTCCAAAGAGATCCTCAGGATTAATTAGCAGGTTTAGTCAACTCTTATCTCTTGGCGCCGAAGAGGCACGATCAGTACCAACCAAAGGACAACTGGTTGCTCATCAGCAAGCTACACAAACAATTCATAAGTGTCACATTGACAGCATATTCAGTGAGAGTAAATTTCTGCAAGCTGAATCTTTATTGTATCTTGCAAGAGCACTCATTAATGCTGGAGCTCAACCTCTGAAAGGGAACAGAATATCTGAGGATGAAGACACTTCAGTTTTCTGCCTGGAGTTACTGGTGACAATCACTCTGAATAACAGGGATCGAGTTGGACTTCTTTGGAAGGGTGTTTTTGAGCACATATCCAATATTGTTCAGTCAACTGTGATGCCTTGTGCACTGGTAGAAAGGGCTGTTTTTGGACTTTTTAGAATTTGCCATCGCTTACTTCCCTATAAAGAGAACATTACTGATGAACTTTTGAGGTCCCTGCAACTTGTCTTGAAGCTTGACGCACGGGTTGCAGATGCATACTACGAGCAGATTACACAGGAGGTCAATCGCCTTGTTAAGGCAAATGCTTCTCATATTAGATCTCAGTTTGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAAGCTGGATTTGATGTGCTGATGTTCATTATGTCTGATGGAGCTCACTTGCTTCCTGCTAACTACATTCTCTGTGTAGATGTTGCTAGACAGTTTGCTGAGTCTCGTGTAGGACTGGTAGATCGGTCTATAATTGCACTGGATCTTATGGCAGGTTCTGTCAATTGTTTAGAAAAGTGGTCTAATAATGCTAAGAAAGCAGTCAAAGAAGAGGAAGTGGAAAAGATGTTGCAGGATATTGGGGAGATGTGGTTTAGGCTAGTGCAGGGACCGAGGAAAGTATGTTTGGACCGGAGAGAGGAGGTTAGAAATCATGCATTTTTATCTTTGCAGAAGTGCTTTACAGGAGCTGTTGGGATTCACCTCCCACCCGATTTGTGGTTAACATGTTTTGATCAAGTGATCTTCACCGTGCTGGATGACCTGCTTGAAATTGCGCAGGCGCACTCTCAAAAGGACTACCGGAACATAGAAGGAACACTTGTTATTGCCTTGAAACTCTTGTCTAAAGTTTTCCTCCAGTTTCTCCAAGAACTATCGCAATTGGCAGCCTTCTGCAAACTATGGGAGGGTATGCTAAGCCATATGGAAAAATGTGTGAAGGTGAAAATTCGGGGAAGGAGAAGTGAGAAGCTTCAAGAGCTTGTGCCTGAGCTTCTGAAGAACACTTTGCTTGTTATGAAATCCAGGGGCATACTAGTGCAGAGCAGTGGCTCAGGAGAAAATAGTTTGTGGGAACTGACATGGCTACATATGAAGAATATTGCTCCCTCATTGCAGTCTGAGGTGTTCCCTGAGCAAGATTCAGAGCAGCTACAGTCTCAGCACAAACAGATTGAAGCAGATGGAAGCTTGGGACTTGATGCAAACATTTCTGTTCCTTCAAATGAAAAAGTGGGCCAAGATGGTGCTGGGATCAGTTGGGAAGAGGTTCAAGCTGATTATGCAGAATATGACATTATTATTGTGGTTGGAGCAGTTTGA 4239 0.4124 MAESMACHQPCLVSPAFLDVIRSDETSAPITGVALSSVYKILTLDVIDQHTVNVGDTMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKGKASVRLSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRSIFFHLQNIDNTKCAFINGTATLKQESNGLNNEHALASGQLENGRLNSAHDAQPLSPGIASSTATVVTVAVMDENTAIASRGNKTDPHELQSMTEPYGVPCMVEIFHFLCSLLNVAEHMGVNPRSNTITFDEDVPLFALTSINSAIELGGASFCRHPRLLSLIQDELFRNLMQFGLSMSPLVLSMVCSIVLNLYHHLCTELKLQLEAFFSCVILRVAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYVNFDCDISCSNVFEDIANLLSKSAFPVNNPLSSIHILALDGLIAVMQGIAERIGRGSLSSEQSPVNFEEYTPFWMEKCDSFGDPNDWVPFVRRRKYIKRRLMIGADHFNRDVKKGLEFLQGTHLLPNKLDPQSVAFFLRYTAGLDKNLIGDFLGNHDEFCVQVLHEFAWTFDFQDMTLDTALRVFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRHINDGNDLPREFVSEIYHSICKNEIRTTPEPGFGFPEMTPSRWISLMHKSKKTAPFIVSDSRAYLDYDLFVALSGPTIAAISVVFDNAENEEVHQTCMDGFLAIAKISAYYHLENVLDDLVVCLCKFITILDPLLFEESVLAFGDDTKARMATETVFTIANRYGDYIRTGWRNILDCILIFHKLGLLPTQLASDAADESQVTTETGHGKPNSNSSSSTHLQYMTPKRSSGLISRFSQLLSLGAEEARSVPTKGQLVAHQQATQTIHKCHIDSIFSESKFLQAESLLYLARALINAGAQPLKGNRISEDEDTSVFCLELLVTITLNNRDRVGLLWKGVFEHISNIVQSTVMPCALVERAVFGLFRICHRLLPYKENITDELLRSLQLVLKLDARVADAYYEQITQEVNRLVKANASHIRSQFGWRTITSLLSITARHLEASEAGFDVLMFIMSDGAHLLPANYILCVDVARQFAESRVGLVDRSIIALDLMAGSVNCLEKWSNNAKKAVKEEEVEKMLQDIGEMWFRLVQGPRKVCLDRREEVRNHAFLSLQKCFTGAVGIHLPPDLWLTCFDQVIFTVLDDLLEIAQAHSQKDYRNIEGTLVIALKLLSKVFLQFLQELSQLAAFCKLWEGMLSHMEKCVKVKIRGRRSEKLQELVPELLKNTLLVMKSRGILVQSSGSGENSLWELTWLHMKNIAPSLQSEVFPEQDSEQLQSQHKQIEADGSLGLDANISVPSNEKVGQDGAGISWEEVQADYAEYDIIIVVGAV 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1510 1412 CDD Sec7 487 670 IPR000904 GO:0005085|GO:0032012
Ssu9g1510 1412 Gene3D - 563 677 IPR023394 -
Ssu9g1510 1412 Pfam Sec7 domain 487 670 IPR000904 GO:0005085|GO:0032012
Ssu9g1510 1412 SUPERFAMILY ARM repeat 271 1278 IPR016024 -
Ssu9g1510 1412 Gene3D - 480 562 - -
Ssu9g1510 1412 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 9 1383 - -
Ssu9g1510 1412 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 240 401 IPR032691 -
Ssu9g1510 1412 ProSiteProfiles SEC7 domain profile. 479 668 IPR000904 GO:0005085|GO:0032012
Ssu9g1510 1412 SMART sec7_5 483 670 IPR000904 GO:0005085|GO:0032012
Ssu9g1510 1412 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1383 - -
Ssu9g1510 1412 MobiDBLite consensus disorder prediction 842 866 - -
Ssu9g1510 1412 SUPERFAMILY Sec7 domain 484 672 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1510 Ssu-Chr9 50880144 50885345 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1510 K18443 - gmx:100789674 2460.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2950 6 67859693 67862984 Ssu9g1510 9 50880144 50885345 PCT