Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1443 ATGCTATCTACTGAACACAATTTGCTTTcgtttgttattattgttgtttctgTTCCCTCTTGTTCCTTAAACTCTTTATTTCAAAAATCCTTAAAAagggtgaaaaagaaaaaaaaaatggtggctGTGGTTTCCCAAGAAAATGTTGTGGCATTGGTTTCTCGTACGGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATCCCATACAGATTTAAGATTGGGGAGAAAACTTCCTTGGACGTTTCTGACGAATTGGAAGTTCTGGTTATTAGTTCTCAGAAAGGAAAAGGGATGCTATTCCCAAAGGGAGGCTGGGAATTAGACGAATCAAAAAAGGAGGCAGCTTTGCGAGAAACCATAGAGGAAGCTGGGGTGCGAGGCATCGTTGGGGATGAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTGCTTGTTCAAGAGCAATTGGAGTTCTGGCCAGAGCAAAACGTTCGTCAAAGAACATGGATGAGCGTCACCGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGACTAGTAAACCGTCTAACGGGTCAAAAACTTGGTCGAAAGAAGCAAGTTCTTGGTTCTATGAATTACATAGGAGAGGCCAAATCTGACTTGTAA 696 0.3966 MLSTEHNLLSFVIIVVSVPSCSLNSLFQKSLKRVKKKKKMVAVVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKTSLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGDELGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNVRQRTWMSVTEARDVCQHWWMKEALDRLVNRLTGQKLGRKKQVLGSMNYIGEAKSDL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1443 231 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 45 221 - -
Ssu9g1443 231 CDD Nudix_Hydrolase_9 69 196 - -
Ssu9g1443 231 ProSiteProfiles Nudix hydrolase domain profile. 66 203 IPR000086 -
Ssu9g1443 231 SUPERFAMILY Nudix 60 206 IPR015797 -
Ssu9g1443 231 ProSitePatterns Nudix box signature. 110 131 IPR020084 GO:0016787
Ssu9g1443 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 51 205 - -
Ssu9g1443 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 45 221 - -
Ssu9g1443 231 Pfam NUDIX domain 93 200 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1443 Ssu-Chr9 49499000 49500462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1443 K07766 - gmx:100795999 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1443 9 49499000 49500462 Ssu6g2863 6 66402889 66404292 PCT