Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2863 ATGGTGGCTTTGATTTCCCAAGAAAACGTTGTTGCATTGGTTTCTCGTACAGGCAGGGAGTTGCAGCGCTACAGAAAAGGTCGTCGCCAAGTCGTGGGATGCATACCATACAGATATAAAATTGGTGATCGAACTTCCTTGGAGGCACCAGAAGAATTAGAAGTTTTGGTTATTACTTCTCAGAAAGGCAAAGGGATGCTATTTCCTAAGGGAGGGTGGGAATTAGACGAATCTAAAAAGGACGCAGCTTTGCGAGAAACCATAGAGGAAGCAGGGGTACGAGGCACTGTTGAGGGTAAATTGGGTAAGTGGAGTTTCAAGAGCAAAACTCATGATACTTTTTATGAAGGCTATATGTTCCCTCTACTTGTTCAAGAGCAATTAGAGTTCTGGCCAGAACAGAATGTTCGTCAAAGAATATGGATGAGCGTTTCTGAAGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCTCTAGAGAGACTAGTAAACCGTCTCACGGAGCGGAAACTTGGTCGTGTAAGACAAATAGTAGGTTCTATACAATGCATAGGAGGTGGCAAATCTGACTTGTAA 579 0.4352 MVALISQENVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIGDRTSLEAPEELEVLVITSQKGKGMLFPKGGWELDESKKDAALRETIEEAGVRGTVEGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNVRQRIWMSVSEAREVCQHWWMKEALERLVNRLTERKLGRVRQIVGSIQCIGGGKSDL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2863 192 Pfam NUDIX domain 54 162 IPR000086 -
Ssu6g2863 192 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 179 - -
Ssu6g2863 192 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 179 - -
Ssu6g2863 192 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Ssu6g2863 192 SUPERFAMILY Nudix 19 168 IPR015797 -
Ssu6g2863 192 CDD Nudix_Hydrolase_9 30 157 - -
Ssu6g2863 192 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Ssu6g2863 192 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2863 Ssu-Chr6 66402889 66404292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2863 K07766 - gmx:100305863 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1443 9 49499000 49500462 Ssu6g2863 6 66402889 66404292 PCT