Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1437 ATGGGGATAAGGATCGGCGGGAAGAGACTGAATATCTCGCCGGCGGTTTTCCGCGCGGATGCTGGCGGGTCGGGTCAAACCATGGTTGACTCCGGATCCGAGTTTACGTACCTGGTTAATGAGGCTTATGATAAGGTGCGGGCGGAGGTGGTTAGGGTTGTGGGGCCCAGGATGAAGAACGGGTACGTGTACGGTGGTGTTGCCGACATGTGTTTTGATGGGAATGCGGTTGAGATCGGACGGCTGATAGGGGACATGGTGTTTGAGTTTGAGAAGGGCGTGGAAATAGTGGTTCCCAAGGAGAGGGTTCTCGCCACCGTGGAGGGTGGGGTCCACTGCGTCGGGATTGGGAACTCTGATAGATTGGGTGCGACCAGTAACATTATTGGGAATTTTCACCAGCAAAATCTGTGGGTGGAGTTTGATCTCGCCAATCGCAGAGTGGGTTTCGGTACGGCTGATTGTAGCAGATTGGGTAAGTAG 483 0.5424 MGIRIGGKRLNISPAVFRADAGGSGQTMVDSGSEFTYLVNEAYDKVRAEVVRVVGPRMKNGYVYGGVADMCFDGNAVEIGRLIGDMVFEFEKGVEIVVPKERVLATVEGGVHCVGIGNSDRLGATSNIIGNFHQQNLWVEFDLANRRVGFGTADCSRLGK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1437 160 Pfam Xylanase inhibitor C-terminal 2 151 IPR032799 -
Ssu9g1437 160 Gene3D Acid Proteases 1 159 IPR021109 -
Ssu9g1437 160 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 160 - -
Ssu9g1437 160 ProSiteProfiles Peptidase family A1 domain profile. 1 151 IPR033121 -
Ssu9g1437 160 PANTHER ASPARTYL PROTEASE-RELATED 2 160 IPR001461 GO:0004190|GO:0006508
Ssu9g1437 160 SUPERFAMILY Acid proteases 2 158 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1437 Ssu-Chr9 49381405 49381887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1437 30 160 Miscellaneous Gene Families AT1G77480 28.966 7.72e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1437 - - gmx:100803089 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1437 9 49381405 49381887 Ssu6g2856 6 66301716 66303020 PCT